Basic Information:

  VIRBase ID:  

VHID00641257

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:  MIMAT0001570          Plcb1:  NM_019677     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-7-5p	Plcb1
miRBase Accession/Entrez ID	MIMAT0001570	18795
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	3110043I21Rik//AI132408//mKIAA0581//Plcb

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Plcb1	chr2:135242514(+) A-I      intronic chr2:135242524(+) A-I      intronic chr2:134929249(+) A-I      intronic chr2:135240958(+) A-I      intronic chr2:134929193(+) A-I      intronic chr2:135240947(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Plcb1	chr2:135103457(+) A-I intron -    22524474 chr2:135103513(+) A-I intron -    22524474 chr2:135415211(+) A-I intron -    22524474 chr2:135415222(+) A-I intron -    22524474 chr2:135416778(+) A-I intron -    22524474 chr2:135416788(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Plcb1	chr2:134786098-134786099(+) m6A 5'UTR       25412662//24981863 chr2:134786150-134786151(+) m6A 5'UTR       25412662//24981863 chr2:134813633-134813634(+) m6A CDS//exon       25683224//22608085 chr2:134813663-134813664(+) m6A CDS//exon       25683224//22608085 chr2:134988199-134988200(+) m6A exon//intron       25683224//22608085 chr2:135252797-135252798(+) m6A 3'UTR//CDS//exon       25683224//22608085 chr2:135252814-135252815(+) m6A 3'UTR//CDS//exon       25683224//22608085 chr2:135262122-135262123(+) m6A 3'UTR//CDS//exon       25683224//22608085 chr2:135294918-135294919(+) m6A CDS       25683224//25412662//22608085 chr2:135294935-135294936(+) m6A CDS       25683224//25412662//22608085 chr2:135310938-135310939(+) m6A CDS       25683224//22608085 chr2:135310998-135310999(+) m6A CDS       25683224//22608085 chr2:135311015-135311016(+) m6A CDS       25683224//22608085 chr2:135333350-135333351(+) m6A CDS       25683224//22608085 chr2:135333399-135333400(+) m6A CDS       25683224//22608085 chr2:135335465-135335466(+) m6A CDS       25683224//22608085 chr2:135335473-135335474(+) m6A CDS       25683224//22608085 chr2:135335479-135335480(+) m6A CDS       25683224//22608085 chr2:135337476-135337477(+) m6A CDS       25683224//22608085 chr2:135337554-135337555(+) m6A CDS       25683224//22608085 chr2:135340677-135340678(+) m6A CDS       25683224//22608085 chr2:135340746-135340747(+) m6A CDS       25683224//22608085 chr2:135344196-135344197(+) m6A CDS       25683224//22608085 chr2:135344233-135344234(+) m6A CDS       25683224//22608085 chr2:135344256-135344257(+) m6A CDS       25683224//22608085 chr2:135344262-135344263(+) m6A CDS       25683224//22608085 chr2:135344284-135344285(+) m6A CDS       25683224//22608085 chr2:135344303-135344304(+) m6A CDS       25683224//22608085 chr2:135346329-135346330(+) m6A CDS       25683224//22608085 chr2:135346389-135346390(+) m6A CDS       25683224//22608085 chr2:135347387-135347388(+) m6A CDS       25683224//22608085 chr2:135347415-135347416(+) m6A CDS       25683224//25412662//22608085 chr2:135359668-135359669(+) m6A CDS       25683224//25412662//22608085 chr2:135359692-135359693(+) m6A CDS       25683224//25412662//22608085 chr2:135359698-135359699(+) m6A CDS       25683224//25412662//22608085 chr2:135362406-135362407(+) m6A CDS       25683224//22608085 chr2:135364819-135364820(+) m6A CDS       25683224//24981863 chr2:135364831-135364832(+) m6A CDS       25683224//24981863 chr2:135364851-135364852(+) m6A CDS       25683224//24981863 chr2:135364864-135364865(+) m6A CDS       25683224//24981863 chr2:135364877-135364878(+) m6A CDS       25683224//24981863 chr2:135364974-135364975(+) m6A CDS       25683224//24981863 chr2:135370426-135370427(+) m6A CDS       25683224//24981863 chr2:135370467-135370468(+) m6A CDS       25683224//24981863 chr2:135370509-135370510(+) m6A CDS       25683224//24981863 chr2:135370518-135370519(+) m6A CDS       25683224//24981863 chr2:135370588-135370589(+) m6A CDS       25683224//24981863//22608085 chr2:135370597-135370598(+) m6A CDS       25683224//24981863//22608085 chr2:135386133-135386134(+) m6A CDS       25683224//24981863//22608085 chr2:135386343-135386344(+) m6A CDS       25683224//25412662//24981863//22608085 chr2:135387142-135387143(+) m6A CDS       25683224//25412662//24981863//22608085 chr2:135387820-135387821(+) m6A CDS       25683224//25412662//24981863 chr2:135387829-135387830(+) m6A CDS       25683224//25412662//24981863 chr2:135387841-135387842(+) m6A CDS       25683224//25412662//24981863 chr2:135399651-135399652(+) m6A 3'UTR//intron       25412662//24981863//25569111//22608085 chr2:135472083-135472084(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111//22608085 chr2:135472155-135472156(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111//22608085 chr2:135472209-135472210(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111//22608085 chr2:135472248-135472249(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111//22608085 chr2:135472301-135472302(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:135472329-135472330(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr2:135472406-135472407(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr2:135472463-135472464(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr2:135472480-135472481(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr2:135472574-135472575(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr2:135472691-135472692(+) m6A 3'UTR       25683224//24981863//22608085 chr2:135474143-135474144(+) m6A 3'UTR       24981863 chr2:135474203-135474204(+) m6A 3'UTR       24981863 chr2:135474290-135474291(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr2:135474302-135474303(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr2:135474346-135474347(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr2:135474351-135474352(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr2:135474373-135474374(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr2:135474450-135474451(+) m6A 3'UTR       25683224//24981863//22608085 chr2:135474882-135474883(+) Y 3'UTR//exon       26075521

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-7-5p
Interactor2: Plcb1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar