Basic Information:

  VIRBase ID:  

VHID00641174

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:  MIMAT0001570          Mmp2:  NM_008610     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-7-5p	Mmp2
miRBase Accession/Entrez ID	MIMAT0001570	17390
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	Clg//Clg4a//Ge//GelA//MMP-//MMP-2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mmp2	chr8:92827377-92827378(+) m6A 5'UTR       25412662//24981863//25569111 chr8:92827442-92827443(+) m6A 5'UTR       25412662//24981863//25569111 chr8:92827484-92827485(+) m6A 5'UTR       25412662//24981863//25569111 chr8:92827568-92827569(+) m6A 5'UTR       25412662//24981863//25569111 chr8:92827588-92827589(+) m6A 5'UTR       25412662//24981863//25569111 chr8:92827659-92827660(+) m6A CDS       25412662 chr8:92832800-92832801(+) m6A CDS       25412662 chr8:92832873-92832874(+) m6A CDS       25412662 chr8:92843586-92843587(+) m6A exon//intron       25569111 chr8:92843832-92843833(+) m6A CDS//exon       25569111 chr8:92846200-92846201(+) m6A CDS//exon       25412662 chr8:92846208-92846209(+) m6A CDS//exon       25412662 chr8:92846227-92846228(+) m6A CDS//exon       25412662 chr8:92850151-92850152(+) m6A CDS//exon       25412662 chr8:92850178-92850179(+) m6A CDS//exon       25412662 chr8:92850220-92850221(+) m6A CDS//exon       24981863//25412662 chr8:92852606-92852607(+) m6A CDS//exon       24981863//25412662 chr8:92852648-92852649(+) m6A CDS//exon       24981863//25412662//25569111 chr8:92852996-92852997(+) m6A 3'UTR//exon//intron       25456834//24981863//25569111 chr8:92853080-92853081(+) m6A 3'UTR//intron       25456834//24981863 chr8:92853110-92853111(+) m6A 3'UTR//intron       25456834//24981863 chr8:92853206-92853207(+) m6A 3'UTR       24981863//25569111 chr8:92853318-92853319(+) m6A 3'UTR       24981863 chr8:92853387-92853388(+) m6A 3'UTR       24981863 chr8:92853403-92853404(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Mmp2	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-7-5p
Interactor2: Mmp2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar