Detail Information

Basic Information:


  VIRBase ID:  

VHID00641149

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:           Llgl1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-7-5p Llgl1
miRBase
Accession/Entrez ID
MIMAT0001570 16897
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - AI325176//Lg//Lgl1//Llglh//Mgl1

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Llgl1
chr11:60699811-60699812(+) m6A 5'UTR       25412662//24981863//25569111
chr11:60706033-60706034(+) m6A CDS//exon       25683224//22608085
chr11:60706093-60706094(+) m6A CDS       25683224//22608085
chr11:60706249-60706250(+) m6A CDS       25683224//22608085
chr11:60706260-60706261(+) m6A CDS       25683224//22608085
chr11:60706332-60706333(+) m6A CDS       25683224//22608085
chr11:60706960-60706961(+) m6A CDS       25683224//22608085
chr11:60707040-60707041(+) m6A CDS       25683224//22608085
chr11:60707056-60707057(+) m6A CDS       25683224//22608085
chr11:60707245-60707246(+) m6A CDS       25683224//22608085
chr11:60707253-60707254(+) m6A CDS       25683224//22608085
chr11:60708606-60708607(+) m6A CDS       25683224//25412662
chr11:60708635-60708636(+) m6A CDS       25683224//25412662
chr11:60708642-60708643(+) m6A CDS       25683224//25412662
chr11:60709546-60709547(+) m6A CDS       25412662//22608085
chr11:60710058-60710059(+) m6A CDS       25412662//22608085
chr11:60710107-60710108(+) m6A CDS       25412662//22608085
chr11:60710319-60710320(+) m6A CDS       25412662//22608085
chr11:60712658-60712659(+) m6A CDS       25683224//25569111//22608085
chr11:60712665-60712666(+) m6A CDS       25683224//25569111//22608085
chr11:60712930-60712931(+) m6A CDS       25683224//25569111
chr11:60712995-60712996(+) m6A CDS       25683224//25456834//24981863//25569111
chr11:60713139-60713140(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111
chr11:60713151-60713152(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111
chr11:60713160-60713161(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111
chr11:60713270-60713271(+) m6A 3'UTR       25683224//24981863//25569111
chr11:60713510-60713511(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr11:60713542-60713543(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr11:60713559-60713560(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr11:60713574-60713575(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr11:60713778-60713779(+) m6A 3'UTR       25683224//24981863//25569111//22608085
chr11:60713804-60713805(+) m6A 3'UTR       25683224//24981863//25569111//22608085
chr11:60713906-60713907(+) m6A 3'UTR       25683224//25456834//24981863//25569111
chr11:60713986-60713987(+) m6A 3'UTR       25683224//25456834//24981863//25569111
chr11:60714113-60714114(+) m6A 3'UTR       25683224

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-7-5p
Interactor2: Llgl1

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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