Basic Information:

  VIRBase ID:  

VHID00640844

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.8589

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:  MIMAT0001570          Birc5:  NM_001012273     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-7-5p	Birc5
miRBase Accession/Entrez ID	MIMAT0001570	11799
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	A//AAC-11//Api4//s//survivin40//T//TIAP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Birc5	chr11:117849396-117849397(+) m6A CDS       25683224//25412662//25569111 chr11:117849420-117849421(+) m6A CDS       25683224//25412662//25569111 chr11:117849438-117849439(+) m6A CDS       25683224//25412662//25569111 chr11:117849845-117849846(+) m6A CDS       25683224//25412662//25569111 chr11:117852725-117852726(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:117852749-117852750(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:117852754-117852755(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:117852772-117852773(+) m6A CDS       25683224//25412662//24981863//25569111 chr11:117852802-117852803(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr11:117855163-117855164(+) m6A 3'UTR//intron       25683224//24981863//25569111 chr11:117855233-117855234(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr11:117855263-117855264(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr11:117855272-117855273(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr11:117855335-117855336(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr11:117855415-117855416(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr11:117855431-117855432(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr11:117855512-117855513(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr11:117855540-117855541(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr11:117855558-117855559(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr11:117855732-117855733(+) m6A 3'UTR       25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-7-5p
Interactor2: Birc5

Evidence Support:

Strong-Evidence	qRT-PCR
Weak-Evidence	qCLASH
Support Database	ViRBase

References:

PMID	31363027	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	NIH 3T12 cells	Interactor2 expression	None
Description	Table S4. Host mRNA targets of mghv-miR-M1-7-5p and mghv-miR-M1-7-3p identified by qCLASH in HE2.1 B cells.