Basic Information:

  VIRBase ID:  

VHID00640697

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Gatc:  NM_029645     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Gatc
miRBase Accession/Entrez ID	MIMAT0001569	384281
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2010003O18Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Gatc	chr5:115333894-115333895(-) m6A 3'UTR       24981863 chr5:115333927-115333928(-) m6A 3'UTR       24981863 chr5:115333962-115333963(-) m6A 3'UTR       24981863 chr5:115334018-115334019(-) m6A 3'UTR       24981863 chr5:115334073-115334074(-) m6A 3'UTR       24981863 chr5:115334087-115334088(-) m6A 3'UTR       24981863 chr5:115334100-115334101(-) m6A 3'UTR       24981863 chr5:115334230-115334231(-) m6A 3'UTR       25456834//24981863//25569111 chr5:115334252-115334253(-) m6A 3'UTR       25456834//24981863//25569111 chr5:115334275-115334276(-) m6A 3'UTR       25456834//24981863//25569111 chr5:115334303-115334304(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:115334333-115334334(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:115334351-115334352(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:115334391-115334392(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:115334412-115334413(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:115334420-115334421(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:115334455-115334456(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:115334471-115334472(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:115334501-115334502(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:115334566-115334567(-) m6A CDS       24981863//25569111//22608085 chr5:115334575-115334576(-) m6A CDS       24981863//25569111//22608085 chr5:115335518-115335519(-) m6A CDS       25569111 chr5:115340844-115340845(-) m6A CDS       25569111 chr5:115340883-115340884(-) m6A CDS       25569111 chr5:115340931-115340932(-) m6A CDS       25412662//25569111 chr5:115340955-115340956(-) m6A CDS       25412662//25569111 chr5:115341040-115341041(-) m6A CDS       25412662//24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Gatc	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Gatc

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar