Basic Information:

  VIRBase ID:  

VHID00640656

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Atxn7l1:  NM_001374026     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Atxn7l1
miRBase Accession/Entrez ID	MIMAT0001569	380753
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2810423G08Rik//Atxn//Atxn7l4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Atxn7l1	chr12:33147708-33147709(+) m6A 5'UTR       24981863//25569111 chr12:33147788-33147789(+) m6A CDS       25412662//24981863//25569111 chr12:33147812-33147813(+) m6A CDS//exon       25412662//24981863//25569111 chr12:33147868-33147869(+) m6A CDS//exon       25412662//24981863//25569111 chr12:33249862-33249863(+) m6A CDS//intron       25412662//24981863 chr12:33249920-33249921(+) m6A CDS//intron       25683224//25412662//24981863//25569111 chr12:33249984-33249985(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111 chr12:33250021-33250022(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111 chr12:33250048-33250049(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111 chr12:33250101-33250102(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111 chr12:33250302-33250303(+) m6A 3'UTR//intron       24981863 chr12:33315461-33315462(+) m6A 5'UTR//exon//intron       24981863 chr12:33325917-33325918(+) m6A 3'UTR//5'UTR//CDS//exon       24981863 chr12:33325975-33325976(+) m6A 3'UTR//CDS//exon       24981863 chr12:33326063-33326064(+) m6A 3'UTR//CDS//exon       24981863 chr12:33326115-33326116(+) m6A 3'UTR//CDS//exon       24981863 chr12:33326127-33326128(+) m6A 3'UTR//CDS//exon       24981863 chr12:33328828-33328829(+) m6A exon//intron       24981863 chr12:33341994-33341995(+) m6A CDS       24981863 chr12:33342138-33342139(+) m6A CDS       24981863//25569111 chr12:33342165-33342166(+) m6A CDS       24981863//25569111 chr12:33342187-33342188(+) m6A CDS       24981863//25569111 chr12:33344911-33344912(+) m6A CDS       24981863//25569111 chr12:33344936-33344937(+) m6A CDS       24981863//25569111 chr12:33344944-33344945(+) m6A CDS       24981863//25569111 chr12:33345698-33345699(+) m6A exon//intron       - chr12:33345837-33345838(+) m6A CDS//exon       25412662 chr12:33345976-33345977(+) m6A CDS//exon       25412662//24981863 chr12:33345986-33345987(+) m6A CDS//exon       25412662 chr12:33358810-33358811(+) m6A CDS//exon       25412662 chr12:33358838-33358839(+) m6A CDS//exon       25412662 chr12:33364433-33364434(+) m6A CDS//exon//intron       25412662 chr12:33364535-33364536(+) m6A CDS//exon//intron       25412662 chr12:33364558-33364559(+) m6A CDS//exon//intron       25412662 chr12:33367106-33367107(+) m6A CDS//exon       24981863//25569111 chr12:33367171-33367172(+) m6A CDS//exon       25683224//24981863//25569111 chr12:33367237-33367238(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr12:33367314-33367315(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr12:33367320-33367321(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr12:33367345-33367346(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr12:33367471-33367472(+) m6A CDS//exon       25683224//25456834//24981863//25569111 chr12:33367501-33367502(+) m6A CDS//exon       25456834//24981863//25569111//22575960 chr12:33367599-33367600(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:33367624-33367625(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:33367634-33367635(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:33367708-33367709(+) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:33367855-33367856(+) m6A CDS//exon//intron       24981863 chr12:33371044-33371045(+) m6A CDS       24981863 chr12:33371080-33371081(+) m6A CDS//intron       24981863 chr12:33371101-33371102(+) m6A CDS//intron       24981863 chr12:33371128-33371129(+) m6A CDS//intron       24981863 chr12:33372868-33372869(+) m6A CDS       24981863 chr12:33372874-33372875(+) m6A CDS       24981863 chr12:33372894-33372895(+) m6A CDS       24981863 chr12:33372957-33372958(+) m6A 3'UTR       24981863 chr12:33373321-33373322(+) m6A 3'UTR       25412662 chr12:33373334-33373335(+) m6A 3'UTR       25412662 chr12:33373654-33373655(+) m6A 3'UTR       24981863 chr12:33373659-33373660(+) m6A 3'UTR       24981863 chr12:33373715-33373716(+) m6A 3'UTR       25683224//24981863 chr12:33373739-33373740(+) m6A 3'UTR       25683224//24981863 chr12:33373747-33373748(+) m6A 3'UTR       25683224//24981863 chr12:33373779-33373780(+) m6A 3'UTR       25683224//24981863 chr12:33374081-33374082(+) m6A 3'UTR       24981863 chr12:33374103-33374104(+) m6A 3'UTR       24981863 chr12:33374185-33374186(+) m6A 3'UTR       24981863 chr12:33375041-33375042(+) m6A 3'UTR       24981863 chr12:33375057-33375058(+) m6A 3'UTR       24981863 chr12:33375062-33375063(+) m6A 3'UTR       24981863 chr12:33375099-33375100(+) m6A 3'UTR       24981863//25569111 chr12:33375176-33375177(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr12:33375306-33375307(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:33375319-33375320(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr12:33375338-33375339(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085//22575960 chr12:33375474-33375475(+) m6A 3'UTR       25683224//25412662//24981863 chr12:33375646-33375647(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Atxn7l1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar