Basic Information:

  VIRBase ID:  

VHID00640583

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Frs2:  NM_177798     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Frs2
miRBase Accession/Entrez ID	MIMAT0001569	327826
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	4732458E18//C330018A15Rik//Frs//Frs2alpha//SN//SNT1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Frs2	chr10:116533294(-) A-I      intronic chr10:116533285(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Frs2	chr10:117096229(-) A-I intron -    22524474 chr10:117096238(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Frs2	chr10:117070503-117070504(-) m6A 3'UTR       24981863 chr10:117070580-117070581(-) m6A 3'UTR       24981863 chr10:117070596-117070597(-) m6A 3'UTR       24981863 chr10:117070706-117070707(-) m6A 3'UTR       24981863 chr10:117071179-117071180(-) m6A 3'UTR       24981863//25456834//25569111 chr10:117071255-117071256(-) m6A 3'UTR       24981863//25456834//25569111 chr10:117071264-117071265(-) m6A 3'UTR       24981863//25456834//25569111 chr10:117071276-117071277(-) m6A 3'UTR       24981863//25456834//25569111 chr10:117071303-117071304(-) m6A 3'UTR       24981863//25456834//25569111 chr10:117071316-117071317(-) m6A 3'UTR       24981863//25456834//25569111 chr10:117071337-117071338(-) m6A 3'UTR       24981863//25456834//25569111 chr10:117071529-117071530(-) m6A 3'UTR       24981863 chr10:117071542-117071543(-) m6A 3'UTR       24981863 chr10:117071590-117071591(-) m6A 3'UTR       24981863//22608085 chr10:117073374-117073375(-) m6A 3'UTR       25569111 chr10:117073443-117073444(-) m6A 3'UTR       25456834//24981863//25569111 chr10:117073452-117073453(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr10:117073558-117073559(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:117073618-117073619(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:117073775-117073776(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:117073840-117073841(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr10:117074020-117074021(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074031-117074032(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074068-117074069(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074101-117074102(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074165-117074166(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074232-117074233(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074329-117074330(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074336-117074337(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074412-117074413(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr10:117074426-117074427(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr10:117074460-117074461(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr10:117074546-117074547(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:117074595-117074596(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074634-117074635(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074654-117074655(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074693-117074694(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:117074739-117074740(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:117074745-117074746(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:117074832-117074833(-) m6A CDS       25456834//24981863//25569111 chr10:117076813-117076814(-) m6A CDS       25569111 chr10:117076952-117076953(-) m6A CDS       25569111 chr10:117100665-117100666(-) m6A 5'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Frs2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar