Detail Information

Basic Information:


  VIRBase ID:  

VHID00640574

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:           Atp11c:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-6-3p Atp11c
miRBase
Accession/Entrez ID
MIMAT0001569 320940
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - A330005H02Rik//AI315324//I//Ig

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Atp11c
chrX:60223612-60223613(-) m6A 3'UTR       26404942
chrX:60223979-60223980(-) m6A 3'UTR       26404942
chrX:60224076-60224077(-) m6A 3'UTR       26404942//22608085
chrX:60224085-60224086(-) m6A 3'UTR       26404942//22608085
chrX:60225367-60225368(-) m6A 3'UTR       24981863
chrX:60321481-60321482(-) m6A CDS//exon       25569111
chrX:60321486-60321487(-) m6A CDS//exon       25569111
chrX:60403818-60403819(-) m6A CDS//intron       25412662//24981863//25569111
chrX:60403875-60403876(-) m6A 5'UTR//intron       25683224//25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-6-3p
Interactor2: Atp11c

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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