Basic Information:

  VIRBase ID:  

VHID00640561

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Strip2:  NM_001037740     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Strip2
miRBase Accession/Entrez ID	MIMAT0001569	320609
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	D330017J20Rik//Fam40//Fam40b

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Strip2	chr6:29898792(+) A-I      intronic chr6:29895687(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Strip2	chr6:29917050-29917051(+) m6A 5'UTR//exon       25412662//24981863//22608085 chr6:29917063-29917064(+) m6A 5'UTR//exon       25412662//24981863//22608085 chr6:29920471-29920472(+) m6A CDS//exon       25412662//24981863 chr6:29923935-29923936(+) m6A CDS//exon       25412662 chr6:29923982-29923983(+) m6A CDS//exon       25412662 chr6:29924971-29924972(+) m6A CDS//exon       25412662 chr6:29925012-29925013(+) m6A CDS//exon       25412662 chr6:29925026-29925027(+) m6A CDS//exon       25412662 chr6:29925034-29925035(+) m6A CDS//exon       25412662 chr6:29931176-29931177(+) m6A CDS//exon       25412662//22608085 chr6:29931184-29931185(+) m6A CDS//exon       25412662//22608085 chr6:29931230-29931231(+) m6A CDS//exon       25412662//22608085 chr6:29931249-29931250(+) m6A CDS//exon       25412662//22608085 chr6:29931259-29931260(+) m6A CDS//exon       25412662//22608085 chr6:29931293-29931294(+) m6A CDS//exon       25412662//22608085 chr6:29956753-29956754(+) m6A CDS//exon       25683224//24981863//25569111 chr6:29956989-29956990(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:29957038-29957039(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:29957081-29957082(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:29957100-29957101(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:29957188-29957189(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:29957194-29957195(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:29957208-29957209(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:29957230-29957231(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:29957319-29957320(+) m6A 3'UTR//exon       25683224//25456834//24981863//22608085 chr6:29957385-29957386(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr6:29957396-29957397(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr6:29957504-29957505(+) m6A 3'UTR//exon       24981863//22608085 chr6:29957521-29957522(+) m6A 3'UTR//exon       24981863//22608085 chr6:29957632-29957633(+) m6A 3'UTR//exon       24981863 chr6:29957674-29957675(+) m6A 3'UTR//exon       24981863 chr6:29957748-29957749(+) m6A 3'UTR//exon       24981863//25456834//22608085 chr6:29957786-29957787(+) m6A 3'UTR       24981863//22608085 chr6:29957870-29957871(+) m6A 3'UTR       25412662//24981863//22608085 chr6:29957920-29957921(+) m6A 3'UTR       25412662//22608085 chr6:29957996-29957997(+) m6A 3'UTR       25412662//22608085 chr6:29958035-29958036(+) m6A 3'UTR       22608085 chr6:29958406-29958407(+) m6A 3'UTR       24981863//22608085 chr6:29958435-29958436(+) m6A 3'UTR       24981863//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Strip2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar