Basic Information:

  VIRBase ID:  

VHID00640542

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Hook3:  NM_207659     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Hook3
miRBase Accession/Entrez ID	MIMAT0001569	320191
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	5830454D03Rik//AI317159//E330005F07Rik

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Hook3	chr8:27212179(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Hook3	chr8:26024475-26024476(-) m6A 3'UTR       24981863//22608085 chr8:26024536-26024537(-) m6A 3'UTR       24981863//22608085 chr8:26027862-26027863(-) m6A 3'UTR       25683224//24981863 chr8:26030072-26030073(-) m6A 3'UTR       25683224//25412662//24981863 chr8:26030118-26030119(-) m6A 3'UTR       25683224//25412662//24981863 chr8:26030163-26030164(-) m6A 3'UTR       25683224//25412662//24981863 chr8:26030215-26030216(-) m6A 3'UTR       25412662//24981863 chr8:26030221-26030222(-) m6A 3'UTR       25412662//24981863 chr8:26030232-26030233(-) m6A 3'UTR       25412662//24981863 chr8:26030244-26030245(-) m6A 3'UTR       25412662 chr8:26030252-26030253(-) m6A 3'UTR       25412662 chr8:26031949-26031950(-) m6A 3'UTR//CDS       24981863 chr8:26031998-26031999(-) m6A 3'UTR//CDS       24981863 chr8:26032430-26032431(-) m6A CDS//intron       24981863 chr8:26032528-26032529(-) m6A CDS//intron       24981863 chr8:26034970-26034971(-) m6A CDS       25412662//24981863 chr8:26035154-26035155(-) m6A CDS       25412662//24981863 chr8:26035213-26035214(-) m6A CDS       25412662//24981863 chr8:26035220-26035221(-) m6A CDS       25412662//24981863 chr8:26038125-26038126(-) m6A exon//intron       24981863 chr8:26039790-26039791(-) m6A exon//intron       25412662 chr8:26067903-26067904(-) m6A CDS//exon       25412662//24981863 chr8:26070076-26070077(-) m6A CDS       24981863 chr8:26070087-26070088(-) m6A CDS       24981863 chr8:26070097-26070098(-) m6A CDS       24981863 chr8:26070146-26070147(-) m6A CDS       24981863 chr8:26070209-26070210(-) m6A CDS       24981863//22608085 chr8:26070250-26070251(-) m6A CDS       24981863//22608085 chr8:26110814-26110815(-) m6A CDS       25683224//25569111//22608085 chr8:26119078-26119079(-) m6A 5'UTR       25683224//25412662//24981863//25569111 chr8:26119084-26119085(-) m6A 5'UTR       25683224//25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Hook3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar