Basic Information:

  VIRBase ID:  

VHID00640511

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Fam168a:  NM_178764     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Fam168a
miRBase Accession/Entrez ID	MIMAT0001569	319604
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2610030B18Rik//B930006L02Rik//mKIAA0280

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fam168a	chr7:100706787-100706788(+) m6A 5'UTR//exon       25683224//25412662//24981863//25569111//22608085 chr7:100706834-100706835(+) m6A 5'UTR//exon       25683224//24981863//25569111//22608085 chr7:100714136-100714137(+) m6A 5'UTR//exon//intron       25683224//24981863//25569111 chr7:100786876-100786877(+) m6A CDS//exon       25683224//22608085 chr7:100824147-100824148(+) m6A CDS//exon       25683224//22608085 chr7:100824164-100824165(+) m6A CDS//exon       25683224//22608085 chr7:100824209-100824210(+) m6A CDS//exon       25683224//22608085 chr7:100824217-100824218(+) m6A CDS//exon       25683224//22608085 chr7:100824224-100824225(+) m6A CDS//exon       25683224//22608085 chr7:100824229-100824230(+) m6A CDS//exon       25683224//22608085 chr7:100831341-100831342(+) m6A CDS//intron       24981863 chr7:100836315-100836316(+) m6A 3'UTR       25683224//24981863//22608085 chr7:100836393-100836394(+) m6A 3'UTR       25683224//24981863//22608085 chr7:100836422-100836423(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr7:100836508-100836509(+) m6A 3'UTR       25683224//24981863//22608085 chr7:100836521-100836522(+) m6A 3'UTR       25683224//24981863 chr7:100836528-100836529(+) m6A 3'UTR       25683224//24981863 chr7:100836583-100836584(+) m6A 3'UTR       25683224//24981863 chr7:100836627-100836628(+) m6A 3'UTR       25683224//24981863 chr7:100836713-100836714(+) m6A 3'UTR       25683224//24981863 chr7:100836778-100836779(+) m6A 3'UTR       25683224//24981863//25569111 chr7:100836787-100836788(+) m6A 3'UTR       25683224//24981863//25569111 chr7:100836858-100836859(+) m6A 3'UTR       25683224//24981863//25569111 chr7:100836895-100836896(+) m6A 3'UTR       25683224//24981863//25569111 chr7:100837022-100837023(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:100837075-100837076(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100837106-100837107(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100837115-100837116(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr7:100837164-100837165(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr7:100837189-100837190(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr7:100837199-100837200(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr7:100837367-100837368(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100837435-100837436(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr7:100837445-100837446(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr7:100837467-100837468(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr7:100837531-100837532(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr7:100837633-100837634(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr7:100837692-100837693(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr7:100837739-100837740(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr7:100837772-100837773(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr7:100837778-100837779(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr7:100837826-100837827(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr7:100837852-100837853(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr7:100837943-100837944(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr7:100837951-100837952(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr7:100837960-100837961(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr7:100838000-100838001(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr7:100838114-100838115(+) m6A 3'UTR       24981863//22608085 chr7:100838517-100838518(+) m6A 3'UTR       25683224//22608085 chr7:100838532-100838533(+) m6A 3'UTR       25683224//22608085 chr7:100838570-100838571(+) m6A 3'UTR       25683224//22608085 chr7:100838647-100838648(+) m6A 3'UTR       25683224//22608085 chr7:100838678-100838679(+) m6A 3'UTR       25683224//22608085 chr7:100838683-100838684(+) m6A 3'UTR       25683224//22608085 chr7:100838784-100838785(+) m6A 3'UTR       25683224//22608085 chr7:100838869-100838870(+) m6A 3'UTR       25683224//22608085 chr7:100838894-100838895(+) m6A 3'UTR       25683224//22608085 chr7:100839123-100839124(+) m6A 3'UTR       25683224//24981863//25569111 chr7:100839128-100839129(+) m6A 3'UTR       25683224//24981863//25569111 chr7:100839175-100839176(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr7:100839180-100839181(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr7:100839185-100839186(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr7:100839192-100839193(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr7:100839228-100839229(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr7:100839298-100839299(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr7:100839318-100839319(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr7:100839356-100839357(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr7:100839422-100839423(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839457-100839458(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839566-100839567(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839627-100839628(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839647-100839648(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839701-100839702(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839713-100839714(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839755-100839756(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839872-100839873(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839892-100839893(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839917-100839918(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839924-100839925(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr7:100839985-100839986(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr7:100840110-100840111(+) m6A 3'UTR       24981863//26404942 chr7:100840140-100840141(+) m6A 3'UTR       24981863//26404942//22608085 chr7:100840326-100840327(+) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942//22608085 chr7:100840359-100840360(+) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942//22608085 chr7:100840383-100840384(+) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942 chr7:100840409-100840410(+) m6A 3'UTR       25683224//25412662//24981863//26404942 chr7:100840428-100840429(+) m6A 3'UTR       25683224//25412662//24981863//26404942 chr7:100840442-100840443(+) m6A 3'UTR       25683224//25412662//24981863 chr7:100840601-100840602(+) m6A 3'UTR       25683224//22608085 chr7:100840616-100840617(+) m6A 3'UTR       25683224//26404942//22608085 chr7:100840665-100840666(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr7:100840711-100840712(+) m6A 3'UTR       26404942//22608085 chr7:100840737-100840738(+) m6A 3'UTR       26404942//22608085 chr7:100840746-100840747(+) m6A 3'UTR       26404942//22608085 chr7:100840947-100840948(+) m6A 3'UTR       25683224//26404942//22608085 chr7:100840985-100840986(+) m6A 3'UTR       25683224//26404942//22608085 chr7:100841002-100841003(+) m6A 3'UTR       25683224//26404942//22608085 chr7:100841014-100841015(+) m6A 3'UTR       25683224//26404942//22608085 chr7:100841052-100841053(+) m6A 3'UTR       25683224//26404942//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Fam168a	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Fam168a

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar