Basic Information:

  VIRBase ID:  

VHID00640453

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Vcp:  NM_009503     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Vcp
miRBase Accession/Entrez ID	MIMAT0001569	269523
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	/p97/VCP//3110001E05//CDC48//p9//p97//p97

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Vcp	chr4:43004990(-) A-I      intronic chr4:43004999(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Vcp	chr4:42992118(-) A-I intron -    22524474 chr4:42992127(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Vcp	chr4:42979986-42979987(-) m6A 3'UTR       24981863 chr4:42980001-42980002(-) m6A 3'UTR       24981863 chr4:42980027-42980028(-) m6A 3'UTR       24981863 chr4:42980385-42980386(-) m6A 3'UTR       24981863//25569111//22608085//22575960 chr4:42980392-42980393(-) m6A 3'UTR       24981863//25569111//22608085//22575960 chr4:42980411-42980412(-) m6A 3'UTR       24981863//25569111//22608085//22575960 chr4:42980452-42980453(-) m6A 3'UTR       24981863//25569111//22608085 chr4:42980491-42980492(-) m6A 3'UTR       24981863//25569111//22608085 chr4:42980553-42980554(-) m6A CDS       25412662//24981863//25569111 chr4:42980619-42980620(-) m6A CDS       25412662//24981863//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Vcp

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar