Basic Information:

  VIRBase ID:  

VHID00640417

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Cadm4:  NM_153112     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Cadm4
miRBase Accession/Entrez ID	MIMAT0001569	260299
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	Igdf4c//Igsf//Igsf4c//Necl//Ts//Tsll2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Cadm4	chr7:25277153(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Cadm4	chr7:24492134(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cadm4	chr7:24499162-24499163(+) m6A CDS       25683224//25412662//25569111//22608085 chr7:24499175-24499176(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr7:24499263-24499264(+) m6A CDS       25683224//22608085 chr7:24499277-24499278(+) m6A CDS       25683224//22608085 chr7:24499629-24499630(+) m6A CDS       25683224//22608085 chr7:24499984-24499985(+) m6A CDS//exon       25683224//22608085 chr7:24500583-24500584(+) m6A CDS//intron       25683224//25412662//22608085 chr7:24500602-24500603(+) m6A CDS//intron       25683224//25412662//22608085 chr7:24500782-24500783(+) m6A CDS//exon       25683224//25412662//22608085 chr7:24500815-24500816(+) m6A CDS//exon       25683224//22608085 chr7:24501569-24501570(+) m6A CDS//exon       25683224//22608085 chr7:24501584-24501585(+) m6A CDS//exon       25683224//22608085 chr7:24501692-24501693(+) m6A CDS//exon       25683224//22608085 chr7:24502691-24502692(+) m6A CDS//exon       25683224//22608085 chr7:24503590-24503591(+) m6A CDS       25683224//24981863 chr7:24503660-24503661(+) m6A 3'UTR       25683224//24981863//26404942 chr7:24503787-24503788(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr7:24503807-24503808(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr7:24503813-24503814(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr7:24503821-24503822(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr7:24503831-24503832(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr7:24503879-24503880(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr7:24503896-24503897(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr7:24503912-24503913(+) m6A 3'UTR       25683224//24981863//26404942//22608085 chr7:24503973-24503974(+) m6A 3'UTR       25683224//26404942//22608085 chr7:24503997-24503998(+) m6A 3'UTR       25683224//22608085 chr7:24504123-24504124(+) m6A 3'UTR       25683224//22608085 chr7:24504150-24504151(+) m6A 3'UTR       25683224//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Cadm4

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar