Basic Information:

  VIRBase ID:  

VHID00640342

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Rsbn1l:  NM_001080977     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Rsbn1l
miRBase Accession/Entrez ID	MIMAT0001569	242860
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	8430412F05Rik//AI447441//C330002G24Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rsbn1l	chr5:20894805-20894806(-) m6A 3'UTR       24981863 chr5:20894821-20894822(-) m6A 3'UTR       24981863 chr5:20894852-20894853(-) m6A 3'UTR       24981863 chr5:20894903-20894904(-) m6A 3'UTR       24981863 chr5:20894927-20894928(-) m6A 3'UTR       - chr5:20894952-20894953(-) m6A 3'UTR       24981863 chr5:20895003-20895004(-) m6A 3'UTR       24981863 chr5:20896102-20896103(-) m6A 3'UTR//CDS       25456834//24981863//25569111//22608085 chr5:20896171-20896172(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr5:20896183-20896184(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr5:20896195-20896196(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr5:20896251-20896252(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr5:20896264-20896265(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr5:20896289-20896290(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr5:20896353-20896354(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr5:20896359-20896360(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr5:20896396-20896397(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr5:20896411-20896412(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr5:20896426-20896427(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr5:20896513-20896514(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:20896577-20896578(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:20896677-20896678(-) m6A 3'UTR//CDS       25456834//24981863//25569111//22608085 chr5:20902292-20902293(-) m6A CDS       22608085 chr5:20902333-20902334(-) m6A CDS       25683224//25569111//22608085 chr5:20902352-20902353(-) m6A CDS       25683224//25569111//22608085 chr5:20902383-20902384(-) m6A CDS       25683224//24981863//25569111//22608085 chr5:20902414-20902415(-) m6A CDS       25683224//24981863//25569111//22608085 chr5:20902434-20902435(-) m6A CDS       25683224//24981863//25569111//22608085 chr5:20905903-20905904(-) m6A CDS       22608085 chr5:20908234-20908235(-) m6A CDS       25456834 chr5:20919553-20919554(-) m6A CDS       25456834//24981863 chr5:20919621-20919622(-) m6A CDS       25456834//24981863//25569111 chr5:20919764-20919765(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:20919846-20919847(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:20919933-20919934(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:20920033-20920034(-) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr5:20920088-20920089(-) m6A CDS       25456834//24981863//25569111//22608085 chr5:20920128-20920129(-) m6A CDS//exon       25456834//24981863//25569111//22608085 chr5:20920141-20920142(-) m6A CDS//exon       25456834//24981863//25569111//22608085 chr5:20920148-20920149(-) m6A CDS//exon       25456834//24981863 chr5:20922372-20922373(-) m6A exon//intron       24981863//25456834 chr5:20922389-20922390(-) m6A exon//intron       24981863//25456834 chr5:20927699-20927700(-) m6A CDS       24981863//25456834 chr5:20927717-20927718(-) m6A CDS       24981863//25456834 chr5:20951350-20951351(-) m6A CDS       25683224//25412662//24981863 chr5:20951440-20951441(-) m6A CDS       25683224//25412662//24981863//25569111 chr5:20951768-20951769(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr5:20951776-20951777(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr5:20951852-20951853(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:20951973-20951974(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:20952094-20952095(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr5:20952133-20952134(-) m6A 5'UTR       25683224//24981863//25569111//22608085 chr5:20952146-20952147(-) m6A 5'UTR       25683224//24981863//22608085 chr5:20952160-20952161(-) m6A 5'UTR       25683224//24981863//22608085 chr5:20952197-20952198(-) m6A 5'UTR       24981863//22608085 chr5:20952257-20952258(-) m6A 5'UTR       24981863//22608085 chr5:20952276-20952277(-) m6A 5'UTR       24981863//22608085 chr5:20952370-20952371(-) m6A 5'UTR       24981863 chr5:20952422-20952423(-) m6A 5'UTR       24981863 chr5:20952432-20952433(-) m6A 5'UTR       24981863 chr5:20952451-20952452(-) m6A 5'UTR       24981863 chr5:20952550-20952551(-) m6A 5'UTR       24981863 chr5:20952581-20952582(-) m6A 5'UTR       24981863 chr5:20953207-20953208(-) m6A 5'UTR       24981863 chr5:20953323-20953324(-) m6A 5'UTR       24981863 chr5:20954581-20954582(-) m6A 5'UTR       24981863 chr5:20954644-20954645(-) m6A 5'UTR       24981863 chr5:20954707-20954708(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rsbn1l	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Rsbn1l

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar