Detail Information

Basic Information:


  VIRBase ID:  

VHID00640217

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:           Med17:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-6-3p Med17
miRBase
Accession/Entrez ID
MIMAT0001569 234959
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 77kDa//C330002H14Rik//Cr//Crsp6//Tra//Trap80

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Med17
chr9:15261453-15261454(-) m6A 3'UTR       24981863
chr9:15261467-15261468(-) m6A 3'UTR       24981863
chr9:15262132-15262133(-) m6A 3'UTR       24981863//25569111
chr9:15262214-15262215(-) m6A 3'UTR       24981863//25569111//22608085
chr9:15262281-15262282(-) m6A CDS       24981863//25569111
chr9:15262299-15262300(-) m6A CDS       24981863//25569111
chr9:15262322-15262323(-) m6A CDS       24981863//25569111
chr9:15262347-15262348(-) m6A CDS       24981863//25569111
chr9:15262374-15262375(-) m6A CDS       24981863//25569111
chr9:15275915-15275916(-) m6A CDS       25412662//22608085
chr9:15275937-15275938(-) m6A CDS       25412662//24981863//22608085
chr9:15275952-15275953(-) m6A CDS       25412662//24981863//22608085
chr9:15275961-15275962(-) m6A CDS       25412662//24981863//22608085
chr9:15275984-15275985(-) m6A CDS       25412662//24981863//22608085
chr9:15277559-15277560(-) m6A CDS       25412662//24981863//22608085
chr9:15277590-15277591(-) m6A CDS       25412662//24981863//22608085
chr9:15277611-15277612(-) m6A CDS       25412662//24981863//22608085
chr9:15277686-15277687(-) m6A CDS       25412662//22608085
chr9:15279587-15279588(-) m6A CDS       25412662//22608085
chr9:15279677-15279678(-) m6A CDS       25412662//22608085

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-6-3p
Interactor2: Med17

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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