Detail Information

Basic Information:


  VIRBase ID:  

VHID00640067

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:           Camk1d:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-6-3p Camk1d
miRBase
Accession/Entrez ID		 MIMAT0001569 227541
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - A630059D12Rik//CaMKId//CaMKIdelta//CKL//CKLiK//E030025C11Rik//mCKLiK

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Camk1d
chr2:5294266-5294267(-) m6A 3'UTR       24981863//22608085
chr2:5294286-5294287(-) m6A 3'UTR       24981863//22608085
chr2:5294370-5294371(-) m6A 3'UTR       24981863//25456834//22608085
chr2:5294496-5294497(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:5294546-5294547(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:5294555-5294556(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:5294624-5294625(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:5294675-5294676(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:5294687-5294688(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:5294772-5294773(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr2:5294791-5294792(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr2:5294890-5294891(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr2:5295455-5295456(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085
chr2:5295501-5295502(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr2:5295506-5295507(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr2:5295540-5295541(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr2:5295614-5295615(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr2:5295619-5295620(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr2:5295627-5295628(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr2:5295642-5295643(-) m6A 3'UTR       24981863//25569111
chr2:5295647-5295648(-) m6A 3'UTR       24981863//25569111
chr2:5295660-5295661(-) m6A 3'UTR       24981863//25569111
chr2:5295877-5295878(-) m6A 3'UTR       24981863//25569111
chr2:5295905-5295906(-) m6A 3'UTR       24981863//25569111
chr2:5296115-5296116(-) m6A 3'UTR       24981863
chr2:5296139-5296140(-) m6A 3'UTR       24981863
chr2:5296670-5296671(-) m6A 3'UTR       25683224//24981863
chr2:5296722-5296723(-) m6A 3'UTR       25683224//24981863//25569111
chr2:5296739-5296740(-) m6A 3'UTR       25683224//24981863//25569111
chr2:5296816-5296817(-) m6A 3'UTR       25683224//24981863//25569111
chr2:5296829-5296830(-) m6A 3'UTR       25683224//24981863//25569111
chr2:5296840-5296841(-) m6A 3'UTR       25683224//24981863//25569111
chr2:5297568-5297569(-) m6A 3'UTR       24981863//25569111
chr2:5297664-5297665(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:5297689-5297690(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:5297731-5297732(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:5297740-5297741(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr2:5297869-5297870(-) m6A 3'UTR       24981863//25569111
chr2:5297892-5297893(-) m6A 3'UTR       24981863//25569111
chr2:5298049-5298050(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr2:5298091-5298092(-) m6A 3'UTR       25683224//24981863//25569111//22608085
chr2:5298115-5298116(-) m6A 3'UTR       25683224//24981863//25569111
chr2:5298186-5298187(-) m6A 3'UTR       25683224//24981863//25569111
chr2:5298211-5298212(-) m6A 3'UTR       25683224//24981863//25569111
chr2:5298258-5298259(-) m6A 3'UTR       24981863//25569111
chr2:5298283-5298284(-) m6A 3'UTR       25569111
chr2:5298293-5298294(-) m6A 3'UTR       25569111
chr2:5298718-5298719(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:5298801-5298802(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr2:5298869-5298870(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr2:5298903-5298904(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr2:5298963-5298964(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085
chr2:5299027-5299028(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr2:5675916-5675917(-) m6A CDS//intron       25412662//22608085
chr2:5714184-5714185(-) m6A CDS//exon       25569111//22608085
chr2:5714393-5714394(-) m6A 5'UTR//exon       25683224//25412662//24981863//25569111//22608085
chr2:5714426-5714427(-) m6A 5'UTR//exon       25412662//24981863//25569111//22608085

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-6-3p
Interactor2: Camk1d

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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