Basic Information:

  VIRBase ID:  

VHID00640045

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Epb41l5:  NM_001113416     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Epb41l5
miRBase Accession/Entrez ID	MIMAT0001569	226352
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1700030C16Rik//AL022914//BE37//E230025E14Rik//Epb4.1//Epb4.1l5//Lul//Lulu1//NB//NBL5

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Epb41l5	chr1:119548421-119548422(-) m6A 3'UTR       25569111 chr1:119548477-119548478(-) m6A 3'UTR       25569111 chr1:119548503-119548504(-) m6A 3'UTR       25569111 chr1:119548512-119548513(-) m6A 3'UTR       25569111 chr1:119548599-119548600(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr1:119548626-119548627(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr1:119548691-119548692(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr1:119548767-119548768(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr1:119548874-119548875(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:119549043-119549044(-) m6A 3'UTR       25683224//25456834//24981863//25569111 chr1:119595852-119595853(-) m6A 3'UTR//exon//intron       22575960 chr1:119595972-119595973(-) m6A CDS//exon//intron       25456834//24981863//22575960 chr1:119595985-119595986(-) m6A CDS//exon//intron       25456834//24981863//22575960 chr1:119596011-119596012(-) m6A CDS//exon//intron       25456834//24981863 chr1:119596020-119596021(-) m6A CDS//exon//intron       25456834//24981863 chr1:119599035-119599036(-) m6A CDS//exon       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Epb41l5	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Epb41l5

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar