Basic Information:

  VIRBase ID:  

VHID00639988

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Zmym5:  NM_001253753     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Zmym5
miRBase Accession/Entrez ID	MIMAT0001569	219105
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	9830124H08Rik

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Zmym5	chr14:57426884(-) A-I      intronic chr14:57420867(-) A-I      intronic chr14:57427725(-) A-I      intronic chr14:57427728(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Zmym5	chr14:56802030(-) A-I intron -    22524474 chr14:56808047(-) A-I intron -    22524474 chr14:56808888(-) A-I intron -    22524474 chr14:56808891(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zmym5	chr14:56792135-56792136(-) m6A 3'UTR       25456834//25569111 chr14:56792160-56792161(-) m6A 3'UTR       25456834//25569111 chr14:56792181-56792182(-) m6A 3'UTR       25456834//25569111 chr14:56792260-56792261(-) m6A 3'UTR       25456834//25569111 chr14:56792300-56792301(-) m6A 3'UTR       25456834//25569111//22608085 chr14:56792426-56792427(-) m6A 3'UTR       25456834//25569111 chr14:56792480-56792481(-) m6A 3'UTR       25456834//24981863//25569111 chr14:56792759-56792760(-) m6A 3'UTR       25683224//25456834 chr14:56792770-56792771(-) m6A 3'UTR       25683224//25456834 chr14:56792796-56792797(-) m6A 3'UTR       25683224//25456834 chr14:56792879-56792880(-) m6A 3'UTR       25683224 chr14:56793252-56793253(-) m6A 3'UTR       25412662 chr14:56793285-56793286(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr14:56793322-56793323(-) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr14:56793337-56793338(-) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr14:56793417-56793418(-) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr14:56793530-56793531(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:56793597-56793598(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr14:56793636-56793637(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr14:56793665-56793666(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr14:56793703-56793704(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr14:56793722-56793723(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr14:56793818-56793819(-) m6A CDS       25456834//24981863//25569111//22608085 chr14:56793891-56793892(-) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr14:56793952-56793953(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:56793972-56793973(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:56793997-56793998(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:56794026-56794027(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:56794135-56794136(-) m6A CDS       25456834//24981863//25569111//22608085 chr14:56794158-56794159(-) m6A CDS       25456834//24981863//25569111//22608085 chr14:56794237-56794238(-) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr14:56794302-56794303(-) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr14:56794330-56794331(-) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr14:56794381-56794382(-) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr14:56794390-56794391(-) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr14:56794479-56794480(-) m6A CDS       24981863//25569111//22608085 chr14:56796705-56796706(-) m6A CDS       24981863 chr14:56796715-56796716(-) m6A CDS       24981863 chr14:56804221-56804222(-) m6A CDS       24981863//25569111 chr14:56804232-56804233(-) m6A CDS       24981863//25456834//25569111 chr14:56804480-56804481(-) m6A CDS       25456834//24981863//25569111 chr14:56804529-56804530(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:56804535-56804536(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:56804560-56804561(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:56804623-56804624(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:56804642-56804643(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:56804664-56804665(-) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr14:56804748-56804749(-) m6A CDS       25456834//24981863//25569111//22608085 chr14:56804820-56804821(-) m6A 5'UTR       24981863//25569111 chr14:56804826-56804827(-) m6A 5'UTR       24981863//25569111 chr14:56804846-56804847(-) m6A 5'UTR       24981863//25569111 chr14:56810550-56810551(-) m6A 5'UTR//intron       24981863//25569111 chr14:56811595-56811596(-) m6A 5'UTR       24981863 chr14:56811673-56811674(-) m6A 5'UTR       24981863 chr14:56811678-56811679(-) m6A 5'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Zmym5

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar