Basic Information:

  VIRBase ID:  

VHID00639922

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Lrrtm3:  NM_178678     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Lrrtm3
miRBase Accession/Entrez ID	MIMAT0001569	216028
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	9630044H04Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Lrrtm3	chr10:63929792-63929793(-) m6A 3'UTR       24981863//22608085 chr10:63929817-63929818(-) m6A 3'UTR       24981863//22608085 chr10:63929899-63929900(-) m6A 3'UTR//exon       24981863//22608085 chr10:63929935-63929936(-) m6A 3'UTR//exon       24981863//22608085 chr10:63929953-63929954(-) m6A 3'UTR//exon       24981863//22608085 chr10:63929958-63929959(-) m6A 3'UTR//exon       24981863//22608085 chr10:63929964-63929965(-) m6A 3'UTR//exon       24981863//22608085 chr10:63929993-63929994(-) m6A 3'UTR//exon       24981863//22608085 chr10:63930072-63930073(-) m6A CDS//exon       25683224//24981863//22608085 chr10:63930115-63930116(-) m6A CDS//exon       25683224//24981863//22608085 chr10:63930125-63930126(-) m6A CDS//exon       25683224//24981863//22608085 chr10:63930148-63930149(-) m6A CDS//exon       25683224//24981863//22608085 chr10:63930189-63930190(-) m6A CDS//exon       25683224//24981863//22608085 chr10:64087535-64087536(-) m6A exon//intron       24981863//22608085 chr10:64087567-64087568(-) m6A exon//intron       24981863//22608085 chr10:64087715-64087716(-) m6A exon//intron       22608085 chr10:64087736-64087737(-) m6A exon//intron       22608085 chr10:64087783-64087784(-) m6A exon//intron       22608085 chr10:64087840-64087841(-) m6A exon//intron       25683224//24981863//22608085 chr10:64087886-64087887(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64087915-64087916(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64087931-64087932(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088151-64088152(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088161-64088162(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088316-64088317(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088412-64088413(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088504-64088505(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088576-64088577(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088635-64088636(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088647-64088648(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088688-64088689(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088768-64088769(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088826-64088827(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088834-64088835(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088850-64088851(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088875-64088876(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088933-64088934(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088976-64088977(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64088996-64088997(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64089056-64089057(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64089161-64089162(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64089233-64089234(-) m6A CDS//exon//intron       25683224//24981863//22608085 chr10:64089724-64089725(-) m6A 5'UTR//exon//intron       25683224//24981863//22608085 chr10:64089743-64089744(-) m6A 5'UTR//exon//intron       25683224//24981863//22608085 chr10:64090137-64090138(-) m6A 5'UTR//exon       25683224//24981863//22608085 chr10:64090167-64090168(-) m6A 5'UTR//exon       25683224//24981863//22608085 chr10:64090213-64090214(-) m6A 5'UTR//exon       25683224//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Lrrtm3	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Lrrtm3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar