Basic Information:

  VIRBase ID:  

VHID00639849

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Pde12:  NM_178668     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Pde12
miRBase Accession/Entrez ID	MIMAT0001569	211948
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2'-PDE//E430028B21Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pde12	chr14:26665113-26665114(-) m6A 3'UTR       24981863 chr14:26665122-26665123(-) m6A 3'UTR       24981863 chr14:26665144-26665145(-) m6A 3'UTR       24981863 chr14:26665307-26665308(-) m6A 3'UTR       24981863 chr14:26665375-26665376(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr14:26665425-26665426(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr14:26665464-26665465(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr14:26665489-26665490(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr14:26665635-26665636(-) m6A CDS       25456834//24981863//25569111//22608085 chr14:26665716-26665717(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr14:26665737-26665738(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr14:26665795-26665796(-) m6A CDS       25456834//24981863//25569111//22608085 chr14:26665867-26665868(-) m6A CDS       25456834//24981863//25569111//22608085 chr14:26665917-26665918(-) m6A CDS       24981863//25569111//22608085 chr14:26666430-26666431(-) m6A CDS       24981863//25569111 chr14:26668293-26668294(-) m6A CDS       24981863//25569111 chr14:26668332-26668333(-) m6A CDS       24981863//25569111 chr14:26668497-26668498(-) m6A CDS       25412662//24981863//25569111 chr14:26668521-26668522(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:26668627-26668628(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:26668641-26668642(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:26668680-26668681(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:26668833-26668834(-) m6A CDS       25683224//25412662//24981863//25569111 chr14:26668873-26668874(-) m6A CDS       25683224//25412662//24981863//25569111 chr14:26668926-26668927(-) m6A CDS       25683224//25412662//25569111//22608085 chr14:26668934-26668935(-) m6A CDS       25683224//25412662//25569111//22608085 chr14:26668949-26668950(-) m6A CDS       25683224//25412662//25569111//22608085 chr14:26669009-26669010(-) m6A CDS       25412662//22608085 chr14:26669262-26669263(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:26669300-26669301(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:26669358-26669359(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:26669370-26669371(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr14:26669473-26669474(-) m6A CDS       25456834//25412662//24981863//25569111 chr14:26669601-26669602(-) m6A 5'UTR       25683224//25412662//24981863//25569111 chr14:26669705-26669706(-) m6A 5'UTR       25683224//25412662//24981863 chr14:26669751-26669752(-) m6A 5'UTR       25683224//25412662//24981863 chr14:26669764-26669765(-) m6A 5'UTR       25683224//24981863 chr14:26669771-26669772(-) m6A 5'UTR       25683224//24981863 chr14:26669788-26669789(-) m6A 5'UTR       25683224//24981863 chr14:26669864-26669865(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Pde12	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Pde12

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar