Basic Information:

  VIRBase ID:  

VHID00639733

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Slc17a6:  NM_080853     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Slc17a6
miRBase Accession/Entrez ID	MIMAT0001569	140919
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2900073D12Rik//DNPI//VGLU//VGLUT2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slc17a6	chr7:51622070-51622071(+) m6A 5'UTR       24981863 chr7:51622175-51622176(+) m6A 5'UTR       24981863//22608085 chr7:51622245-51622246(+) m6A 5'UTR       24981863//22608085 chr7:51622268-51622269(+) m6A 5'UTR       24981863//22608085 chr7:51622276-51622277(+) m6A 5'UTR       24981863//22608085 chr7:51622317-51622318(+) m6A 5'UTR       24981863//22608085 chr7:51622323-51622324(+) m6A 5'UTR       24981863//22608085 chr7:51622396-51622397(+) m6A 5'UTR       24981863//22608085 chr7:51622433-51622434(+) m6A 5'UTR       24981863//22608085 chr7:51622560-51622561(+) m6A 5'UTR       24981863//26404942 chr7:51622616-51622617(+) m6A 5'UTR       24981863//26404942 chr7:51622648-51622649(+) m6A CDS       24981863//26404942 chr7:51622708-51622709(+) m6A CDS       24981863 chr7:51625181-51625182(+) m6A exon//intron       24981863 chr7:51625483-51625484(+) m6A CDS//exon       24981863//22608085 chr7:51626862-51626863(+) m6A CDS//exon       24981863//22608085 chr7:51626870-51626871(+) m6A CDS//exon       24981863//22608085 chr7:51669116-51669117(+) m6A CDS       24981863 chr7:51669130-51669131(+) m6A CDS       24981863 chr7:51669141-51669142(+) m6A CDS       24981863 chr7:51669179-51669180(+) m6A CDS       24981863//22608085 chr7:51669199-51669200(+) m6A CDS       24981863//22608085 chr7:51669340-51669341(+) m6A CDS       24981863//26404942//22608085 chr7:51669445-51669446(+) m6A 3'UTR       24981863//26404942 chr7:51669453-51669454(+) m6A 3'UTR       24981863//26404942 chr7:51669486-51669487(+) m6A 3'UTR       24981863//26404942 chr7:51669492-51669493(+) m6A 3'UTR       24981863//26404942 chr7:51669513-51669514(+) m6A 3'UTR       24981863//26404942 chr7:51669641-51669642(+) m6A 3'UTR       24981863//26404942//22608085 chr7:51669730-51669731(+) m6A 3'UTR       24981863//26404942//22608085 chr7:51669753-51669754(+) m6A 3'UTR       24981863//26404942//22608085 chr7:51669760-51669761(+) m6A 3'UTR       24981863//26404942//22608085 chr7:51669787-51669788(+) m6A 3'UTR       24981863//26404942//22608085 chr7:51669797-51669798(+) m6A 3'UTR       24981863//26404942//22608085 chr7:51669876-51669877(+) m6A 3'UTR       24981863//26404942 chr7:51669897-51669898(+) m6A 3'UTR       24981863//26404942 chr7:51669907-51669908(+) m6A 3'UTR       24981863//26404942 chr7:51669993-51669994(+) m6A 3'UTR       24981863//26404942 chr7:51670519-51670520(+) m6A 3'UTR       26404942 chr7:51670544-51670545(+) m6A 3'UTR       26404942 chr7:51670551-51670552(+) m6A 3'UTR       26404942//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Slc17a6

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar