Detail Information

Basic Information:


  VIRBase ID:  

VHID00639714

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:           Bloc1s4:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-6-3p Bloc1s4
miRBase
Accession/Entrez ID
MIMAT0001569 117197
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 2610101N07Rik//Bl//Blos4//C//Cno

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Bloc1s4
chr5:36747717-36747718(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr5:36747794-36747795(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr5:36747928-36747929(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr5:36747960-36747961(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr5:36747971-36747972(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr5:36748009-36748010(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr5:36748034-36748035(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr5:36748041-36748042(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr5:36748155-36748156(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr5:36748322-36748323(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr5:36748337-36748338(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr5:36748417-36748418(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr5:36748559-36748560(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr5:36748620-36748621(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr5:36748633-36748634(-) m6A CDS       25683224//25456834//25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-6-3p
Interactor2: Bloc1s4

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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