Detail Information

Basic Information:


  VIRBase ID:  

VHID00639462

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:           Fam126a:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-6-3p Fam126a
miRBase
Accession/Entrez ID		 MIMAT0001569 84652
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - AB030242//Drctnnb1a//hycc

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Fam126a
chr5:23961932-23961933(-) m6A 3'UTR//intron       24981863//25412662//25569111
chr5:23961972-23961973(-) m6A 3'UTR//intron       24981863//25412662//25569111
chr5:23962076-23962077(-) m6A 3'UTR//intron       24981863//25412662//25569111
chr5:23962165-23962166(-) m6A 3'UTR//intron       24981863//25569111
chr5:23963899-23963900(-) m6A 3'UTR//intron       24981863
chr5:23963919-23963920(-) m6A 3'UTR//intron       24981863
chr5:23963958-23963959(-) m6A 3'UTR//intron       24981863
chr5:23964174-23964175(-) m6A 3'UTR//intron       25683224//24981863//25569111
chr5:23964232-23964233(-) m6A 3'UTR//intron       25683224//24981863//25412662//25569111
chr5:23964278-23964279(-) m6A 3'UTR//intron       25683224//25412662//24981863//25569111
chr5:23964312-23964313(-) m6A 3'UTR//intron       25683224//25412662//24981863//25569111
chr5:23964374-23964375(-) m6A 3'UTR//intron       25412662//24981863//25569111
chr5:23964443-23964444(-) m6A 3'UTR//intron       25412662//24981863//25569111
chr5:23964594-23964595(-) m6A 3'UTR//intron       25456834//24981863//25569111
chr5:23964819-23964820(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111//22608085
chr5:23964852-23964853(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111//22608085
chr5:23964857-23964858(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111//22608085
chr5:23964984-23964985(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111//22608085
chr5:23965016-23965017(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr5:23965074-23965075(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr5:23965099-23965100(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr5:23965121-23965122(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr5:23965163-23965164(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr5:23965210-23965211(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr5:23965226-23965227(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr5:23965252-23965253(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr5:23965321-23965322(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111
chr5:23965329-23965330(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111
chr5:23966231-23966232(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111
chr5:23966262-23966263(-) m6A CDS//intron       25683224//25412662//24981863//25569111
chr5:23966272-23966273(-) m6A CDS//intron       25683224//25412662//24981863//25569111
chr5:23966307-23966308(-) m6A CDS//intron       25683224//25412662//24981863//25569111
chr5:23966341-23966342(-) m6A CDS//intron       25683224//25412662//25569111
chr5:23979491-23979492(-) m6A CDS       24981863//22608085
chr5:24030063-24030064(-) m6A 5'UTR//exon//intron       25412662
chr5:24030309-24030310(-) m6A 5'UTR//intron       24981863
chr5:24030604-24030605(-) m6A 5'UTR       25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-6-3p
Interactor2: Fam126a

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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