Basic Information:

  VIRBase ID:  

VHID00639221

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Slc35f5:  NM_001356294     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Slc35f5
miRBase Accession/Entrez ID	MIMAT0001569	74150
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1300003P13Rik//AI646727

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slc35f5	chr1:125560674-125560675(+) m6A 5'UTR       25683224//25412662 chr1:125560738-125560739(+) m6A CDS       25683224//25412662 chr1:125561051-125561052(+) m6A 5'UTR//intron       25412662//24981863//25569111 chr1:125589826-125589827(+) Y CDS//exon       26075521 chr1:125595094-125595095(+) m6A 3'UTR       25456834//24981863//25569111 chr1:125595138-125595139(+) m6A 3'UTR       25456834//24981863//25569111 chr1:125595155-125595156(+) m6A 3'UTR       25456834//24981863//25569111 chr1:125595167-125595168(+) m6A 3'UTR       25456834//24981863//25569111 chr1:125595178-125595179(+) m6A 3'UTR       25456834//24981863//25569111 chr1:125595201-125595202(+) m6A 3'UTR       25456834//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Slc35f5	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Slc35f5

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar