Basic Information:

  VIRBase ID:  

VHID00639163

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Rint1:  NM_177323     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Rint1
miRBase Accession/Entrez ID	MIMAT0001569	72772
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1500019C06Rik//2810450M21Rik//Rint-1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rint1	chr5:23787786-23787787(+) m6A 5'UTR//exon       25683224//25412662//25569111 chr5:23787899-23787900(+) m6A exon//intron       25683224//25412662//25569111 chr5:23787940-23787941(+) m6A exon//intron       25683224//25412662//25569111 chr5:23787960-23787961(+) m6A exon//intron       25412662 chr5:23805444-23805445(+) Y CDS//exon//intron       26075521 chr5:23805708-23805709(+) m6A CDS//exon       25412662 chr5:23817150-23817151(+) m6A CDS//exon       25569111//22608085 chr5:23819419-23819420(+) m6A CDS//exon       24981863//25569111//22608085 chr5:23819513-23819514(+) m6A CDS//exon       25683224//25456834//24981863//25412662//25569111//22608085 chr5:23819553-23819554(+) m6A CDS//exon       25683224//25456834//24981863//25412662//25569111//22608085 chr5:23819612-23819613(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819704-23819705(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819726-23819727(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819741-23819742(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819751-23819752(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819759-23819760(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819771-23819772(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819822-23819823(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819828-23819829(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819838-23819839(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819931-23819932(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819978-23819979(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23819988-23819989(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23820073-23820074(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:23820082-23820083(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr5:23820157-23820158(+) m6A 3'UTR//exon       25683224//25456834//24981863//25412662//25569111//22608085 chr5:23820219-23820220(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23820270-23820271(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23820276-23820277(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23820281-23820282(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23820287-23820288(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:23820294-23820295(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rint1	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Rint1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar