Basic Information:

  VIRBase ID:  

VHID00638593

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Huwe1:  NM_021523     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Huwe1
miRBase Accession/Entrez ID	MIMAT0001569	59026
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	5430439H10Rik//Arf-//Arf-bp1//AU041296//C430014N20Rik//C80292//Gm1718//Ib77//Ib772//LASU1//Mul//Mule//Ureb//Ureb1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Huwe1	chrX:151800880-151800881(+) m6A exon       25412662//24981863//25569111 chrX:151800902-151800903(+) m6A exon       25412662//24981863//25569111 chrX:151801195-151801196(+) m6A exon       25412662//24981863//25569111 chrX:151801203-151801204(+) m6A exon       25412662//24981863//25569111 chrX:151801221-151801222(+) m6A exon       25412662//24981863//25569111 chrX:151804529-151804530(+) m6A 5'UTR//exon//intron       - chrX:151806316-151806317(+) m6A 5'UTR//exon//intron       - chrX:151806760-151806761(+) m6A 5'UTR//exon       22608085 chrX:151806772-151806773(+) m6A 5'UTR//exon       22608085 chrX:151806778-151806779(+) m6A 5'UTR//exon       22608085 chrX:151836303-151836304(+) m6A 3'UTR//intron       24981863//22608085 chrX:151840120-151840121(+) m6A 3'UTR//CDS//exon       25683224//22608085 chrX:151840136-151840137(+) m6A 3'UTR//CDS//exon       25683224//22608085 chrX:151840143-151840144(+) m6A 3'UTR//CDS//exon       25683224//22608085 chrX:151840807-151840808(+) m6A 3'UTR//CDS//exon       25683224//22608085 chrX:151840838-151840839(+) m6A 3'UTR//CDS//exon       25683224//22608085 chrX:151843119-151843120(+) m6A 3'UTR//CDS//exon       25683224//22608085 chrX:151845560-151845561(+) m6A exon//intron       25683224 chrX:151854218-151854219(+) m6A 3'UTR//CDS//exon       22608085 chrX:151856115-151856116(+) m6A 3'UTR//CDS//exon       22608085 chrX:151883116-151883117(+) m6A CDS//exon       25412662//22608085 chrX:151883188-151883189(+) m6A CDS//exon       25412662//24981863//22608085 chrX:151883206-151883207(+) m6A CDS//exon       25412662//24981863//22608085 chrX:151883278-151883279(+) m6A CDS//exon       25412662//24981863//22608085 chrX:151885588-151885589(+) m6A CDS       25412662//24981863//22608085 chrX:151885607-151885608(+) m6A CDS       25412662//24981863//22608085 chrX:151885646-151885647(+) m6A CDS       24981863//25412662//22608085 chrX:151886104-151886105(+) m6A CDS       25412662//22608085 chrX:151886138-151886139(+) m6A CDS       25412662//22608085 chrX:151886790-151886791(+) m6A CDS       25412662//22608085 chrX:151886847-151886848(+) m6A CDS       25412662//22608085 chrX:151891028-151891029(+) m6A CDS//intron       25412662//24981863 chrX:151891035-151891036(+) m6A CDS//intron       25412662//24981863 chrX:151891086-151891087(+) m6A 3'UTR//CDS       25412662//24981863//25569111 chrX:151891105-151891106(+) m6A 3'UTR//CDS       25412662//24981863//25569111 chrX:151891111-151891112(+) m6A 3'UTR//CDS       25412662//24981863//25569111 chrX:151891121-151891122(+) m6A 3'UTR//CDS       25412662//24981863//25569111 chrX:151891142-151891143(+) m6A 3'UTR//CDS       25412662//24981863//25569111 chrX:151891153-151891154(+) m6A CDS       25412662//24981863//25569111 chrX:151891766-151891767(+) m6A CDS       24981863//25569111 chrX:151891795-151891796(+) m6A CDS       24981863//25569111 chrX:151891889-151891890(+) m6A CDS       24981863//25569111 chrX:151891895-151891896(+) m6A CDS       24981863//25569111 chrX:151891940-151891941(+) m6A CDS       24981863//25569111 chrX:151891968-151891969(+) m6A CDS       24981863//25569111 chrX:151900928-151900929(+) m6A CDS       22608085 chrX:151900961-151900962(+) m6A CDS       22608085 chrX:151903938-151903939(+) m6A CDS       25412662//22608085 chrX:151903974-151903975(+) m6A CDS       25412662//22608085 chrX:151904403-151904404(+) m6A CDS       25683224//25412662//22608085 chrX:151904445-151904446(+) m6A CDS       25683224//25412662//22608085 chrX:151904995-151904996(+) m6A exon//intron       25683224//25412662//22608085 chrX:151905010-151905011(+) m6A exon//intron       25683224//22608085 chrX:151905073-151905074(+) m6A exon//intron       25683224 chrX:151905115-151905116(+) m6A exon//intron       25683224 chrX:151905366-151905367(+) m6A CDS//exon       25683224//24981863 chrX:151905374-151905375(+) m6A CDS//exon       25683224//24981863 chrX:151905416-151905417(+) m6A CDS//exon       25683224//24981863 chrX:151906968-151906969(+) m6A CDS//intron       25683224//25412662//24981863 chrX:151906987-151906988(+) m6A CDS//intron       25683224//25412662//24981863 chrX:151907004-151907005(+) m6A CDS//intron       25683224//25412662//24981863//25456834//22608085 chrX:151907294-151907295(+) m1A CDS//intron       26863196 chrX:151908730-151908731(+) m6A CDS//exon       25412662//24981863 chrX:151909913-151909914(+) Y CDS//exon       26075521 chrX:151910179-151910180(+) m6A CDS//exon       25412662//24981863//25456834 chrX:151910198-151910199(+) m6A CDS//exon       25412662//24981863//25456834 chrX:151910211-151910212(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chrX:151910226-151910227(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chrX:151910235-151910236(+) m6A CDS//exon       25683224//25412662//24981863//25456834 chrX:151910273-151910274(+) m6A exon//intron       25683224//25412662//24981863//25456834 chrX:151910330-151910331(+) m6A exon//intron       25683224//25412662//24981863 chrX:151910349-151910350(+) m6A exon//intron       25683224//25412662//24981863 chrX:151910361-151910362(+) m6A exon//intron       25683224//25412662//24981863 chrX:151912223-151912224(+) m6A CDS       25683224//24981863 chrX:151912240-151912241(+) m6A CDS       25683224//24981863 chrX:151914150-151914151(+) m6A CDS       25683224//24981863 chrX:151914219-151914220(+) m6A CDS       25683224//24981863//22608085 chrX:151914296-151914297(+) m6A CDS       24981863//22608085 chrX:151914325-151914326(+) m6A CDS       24981863//22608085 chrX:151916975-151916976(+) m6A CDS       25569111//22608085 chrX:151917141-151917142(+) m6A CDS       24981863//25569111 chrX:151917156-151917157(+) m6A CDS       24981863//25569111 chrX:151917179-151917180(+) m6A CDS       24981863//25569111 chrX:151917191-151917192(+) m6A CDS       24981863//25569111 chrX:151917211-151917212(+) m6A CDS       24981863//25569111 chrX:151917257-151917258(+) m6A CDS       24981863//25569111 chrX:151917318-151917319(+) m6A CDS       24981863//25569111 chrX:151917363-151917364(+) m6A CDS       25569111//22608085 chrX:151918400-151918401(+) m6A CDS       25569111//22608085 chrX:151918436-151918437(+) m6A CDS       24981863//25569111//22608085 chrX:151918543-151918544(+) m6A CDS       24981863//25569111 chrX:151918615-151918616(+) m6A CDS       24981863//25569111 chrX:151918688-151918689(+) m6A CDS       24981863//25569111 chrX:151918783-151918784(+) m6A CDS       25683224//24981863//25569111//26404942//22608085 chrX:151918821-151918822(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chrX:151918893-151918894(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chrX:151919605-151919606(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chrX:151919614-151919615(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chrX:151919702-151919703(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chrX:151919711-151919712(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chrX:151919724-151919725(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chrX:151919729-151919730(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chrX:151919759-151919760(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chrX:151919803-151919804(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chrX:151919849-151919850(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chrX:151919898-151919899(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chrX:151919907-151919908(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chrX:151919942-151919943(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chrX:151919962-151919963(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chrX:151920005-151920006(+) m6A CDS       25683224//25412662//24981863//25456834//25569111//22608085 chrX:151921337-151921338(+) m6A CDS//exon       25569111//22608085 chrX:151921352-151921353(+) m6A CDS//exon       25569111//22608085 chrX:151922432-151922433(+) m6A CDS//exon       25412662//22608085 chrX:151922440-151922441(+) m6A CDS//exon       25412662//22608085 chrX:151922487-151922488(+) m6A exon//intron       25412662//22608085 chrX:151922573-151922574(+) m6A exon//intron       25412662//22608085 chrX:151927676-151927677(+) m6A CDS//exon       24981863//22608085 chrX:151927721-151927722(+) m6A CDS//exon       24981863//22608085 chrX:151927729-151927730(+) m6A CDS//exon       24981863//22608085 chrX:151927754-151927755(+) m6A CDS       24981863//22608085 chrX:151928261-151928262(+) m6A CDS       24981863 chrX:151934430-151934431(+) m6A 3'UTR       24981863 chrX:151934651-151934652(+) m6A 3'UTR       24981863 chrX:151935023-151935024(+) m6A 3'UTR       24981863//25456834 chrX:151935057-151935058(+) m6A 3'UTR       24981863//25456834 chrX:151935065-151935066(+) m6A 3'UTR       24981863//25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Huwe1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Huwe1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar