Detail Information

Basic Information:


  VIRBase ID:  

VHID00638579

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:           Bcl11b:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-6-3p Bcl11b
miRBase
Accession/Entrez ID		 MIMAT0001569 58208
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 9130430L19Rik//AI604821//B630002E05Rik//BCL-11B//CTI//Ctip2//Ri//Rit1

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Bcl11b
chr12:107910911-107910912(-) m6A 3'UTR       24981863//22608085
chr12:107910923-107910924(-) m6A 3'UTR       24981863//22608085
chr12:107910949-107910950(-) m6A 3'UTR       24981863//22608085
chr12:107910997-107910998(-) m6A 3'UTR       24981863//22608085
chr12:107911183-107911184(-) m6A 3'UTR       24981863//22608085
chr12:107911207-107911208(-) m6A 3'UTR       24981863//22608085
chr12:107912354-107912355(-) m6A 3'UTR       24981863
chr12:107912420-107912421(-) m6A 3'UTR       24981863//26404942
chr12:107912432-107912433(-) m6A 3'UTR       24981863//26404942
chr12:107913037-107913038(-) m6A 3'UTR       24981863//26404942
chr12:107913095-107913096(-) m6A 3'UTR       24981863//26404942
chr12:107913117-107913118(-) m6A 3'UTR       24981863//26404942
chr12:107913383-107913384(-) m6A 3'UTR       24981863//26404942//22608085
chr12:107913394-107913395(-) m6A 3'UTR       24981863//22608085
chr12:107913420-107913421(-) m6A 3'UTR       24981863//22608085
chr12:107913457-107913458(-) m6A 3'UTR       25456834//24981863//22608085
chr12:107913527-107913528(-) m6A 3'UTR       25456834//24981863//22608085
chr12:107913553-107913554(-) m6A 3'UTR       25456834//24981863//22608085
chr12:107913570-107913571(-) m6A 3'UTR       25456834//24981863//22608085
chr12:107913591-107913592(-) m6A 3'UTR       25456834//24981863//22608085
chr12:107913663-107913664(-) m6A 3'UTR       25456834//24981863//22608085
chr12:107913687-107913688(-) m6A 3'UTR       25456834//24981863//22608085
chr12:107913703-107913704(-) m6A 3'UTR       25456834//24981863//22608085
chr12:107913738-107913739(-) m6A 3'UTR       25456834//24981863//22608085
chr12:107913749-107913750(-) m6A 3'UTR       25456834//24981863//22608085
chr12:107913777-107913778(-) m6A 3'UTR       25456834//24981863//22608085
chr12:107913821-107913822(-) m6A 3'UTR       25456834//24981863//26404942//22608085
chr12:107913843-107913844(-) m6A 3'UTR       25456834//24981863//26404942//22608085
chr12:107913905-107913906(-) m6A 3'UTR       24981863//22608085
chr12:107913915-107913916(-) m6A 3'UTR       24981863//22608085
chr12:107913962-107913963(-) m6A 3'UTR       24981863
chr12:107914042-107914043(-) m6A 3'UTR       24981863
chr12:107914058-107914059(-) m6A 3'UTR       24981863
chr12:107914228-107914229(-) m6A 3'UTR       24981863
chr12:107914248-107914249(-) m6A 3'UTR       24981863
chr12:107914366-107914367(-) m6A 3'UTR       24981863
chr12:107914399-107914400(-) m6A 3'UTR       24981863
chr12:107914543-107914544(-) m6A 3'UTR       24981863
chr12:107914576-107914577(-) m6A 3'UTR       24981863
chr12:107915193-107915194(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr12:107915201-107915202(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr12:107915222-107915223(-) Y 3'UTR//exon       26075521
chr12:107915244-107915245(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr12:107915317-107915318(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr12:107915329-107915330(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr12:107915383-107915384(-) m6A 3'UTR       25456834//25412662//24981863//25569111//26404942//22608085
chr12:107915447-107915448(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr12:107915471-107915472(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr12:107915664-107915665(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr12:107915811-107915812(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr12:107915858-107915859(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr12:107915913-107915914(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr12:107916006-107916007(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr12:107916387-107916388(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr12:107916754-107916755(-) m6A CDS       25412662//24981863//25569111
chr12:107916876-107916877(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr12:107916947-107916948(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr12:107916969-107916970(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr12:107916984-107916985(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr12:107916999-107917000(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr12:107917077-107917078(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr12:107917152-107917153(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr12:107917200-107917201(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr12:107917237-107917238(-) m6A CDS       25412662//24981863//25569111
chr12:107917329-107917330(-) m6A CDS       24981863
chr12:107989472-107989473(-) m6A CDS//intron       24981863
chr12:107989610-107989611(-) m6A CDS//intron       24981863
chr12:107989651-107989652(-) m6A CDS//intron       24981863
chr12:107989682-107989683(-) m6A CDS//intron       24981863//22608085
chr12:107989697-107989698(-) m6A CDS//intron       25412662//24981863//22608085
chr12:108003095-108003096(-) m6A CDS       25412662//24981863
chr12:108003128-108003129(-) m6A CDS       25412662//24981863
chr12:108003204-108003205(-) m6A 5'UTR       25412662//24981863
chr12:108003329-108003330(-) m6A 5'UTR       25412662//24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-6-3p
Interactor2: Bcl11b

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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