Basic Information:

  VIRBase ID:  

VHID00638483

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Impa1:  NM_001310433     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Impa1
miRBase Accession/Entrez ID	MIMAT0001569	55980
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2610002K09Rik//2900059K10Rik//AI325909

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Impa1	chr3:10315072-10315073(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr3:10315100-10315101(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr3:10315105-10315106(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr3:10315175-10315176(-) m6A 3'UTR//exon       25456834//24981863//25569111//26404942//22608085 chr3:10315296-10315297(-) m6A 3'UTR//CDS//exon       24981863//25569111 chr3:10315876-10315877(-) m6A 3'UTR//intron       25683224 chr3:10315881-10315882(-) m6A 3'UTR//intron       25683224 chr3:10315888-10315889(-) m6A 3'UTR//intron       25683224 chr3:10315895-10315896(-) m6A 3'UTR//intron       25683224 chr3:10328976-10328977(-) m6A CDS       24981863//25569111 chr3:10328997-10328998(-) m6A CDS       24981863//25569111 chr3:10331374-10331375(-) m6A 5'UTR       24981863//25569111 chr3:10331419-10331420(-) m6A 5'UTR       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Impa1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Impa1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar