Basic Information:

  VIRBase ID:  

VHID00638414

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Tmx4:  NM_029148     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Tmx4
miRBase Accession/Entrez ID	MIMAT0001569	52837
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2810417D04Rik//4930500L08Rik//AI843224//AW046784//D2Bwg1356e//mKIAA1162//Txndc1//Txndc13

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tmx4	chr2:134594969-134594970(-) m6A 3'UTR       24981863//22608085 chr2:134595025-134595026(-) m6A 3'UTR       24981863//22608085 chr2:134595032-134595033(-) m6A 3'UTR       24981863//22608085 chr2:134595045-134595046(-) m6A 3'UTR       24981863//22608085 chr2:134595087-134595088(-) m6A 3'UTR       24981863//22608085 chr2:134595426-134595427(-) m6A 3'UTR       24981863//22608085 chr2:134597768-134597769(-) m6A 3'UTR       24981863//22608085 chr2:134597818-134597819(-) m6A 3'UTR       25683224//24981863//22608085 chr2:134597837-134597838(-) m6A 3'UTR       25683224//24981863//22608085 chr2:134597858-134597859(-) m6A 3'UTR       25683224//24981863//22608085 chr2:134597868-134597869(-) m6A 3'UTR       25683224//24981863//22608085 chr2:134598696-134598697(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:134598738-134598739(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:134598771-134598772(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:134598777-134598778(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:134599012-134599013(-) m6A exon//intron       25683224//25412662//24981863//25569111//22608085 chr2:134599028-134599029(-) m6A exon//intron       25683224//25412662//24981863 chr2:134599050-134599051(-) m6A exon//intron       25683224//25412662//24981863 chr2:134607470-134607471(-) m6A 3'UTR//intron       25683224//22608085 chr2:134644090-134644091(-) m6A 5'UTR//exon       25412662//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Tmx4	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Tmx4

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar