Basic Information:

  VIRBase ID:  

VHID00638198

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Ywhah:  NM_011738     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Ywhah
miRBase Accession/Entrez ID	MIMAT0001569	22629
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Ywhah	chr5:33367517(+) A-I      intronic chr5:33367516(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Ywhah	chr5:33024867(+) A-I intron -    22524474 chr5:33024868(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ywhah	chr5:33019265-33019266(+) m6A exon//intron       25683224 chr5:33021029-33021030(+) m6A exon//intron       24981863 chr5:33021045-33021046(+) m6A exon//intron       24981863 chr5:33021822-33021823(+) m6A exon//intron       25683224//24981863//25569111 chr5:33026558-33026559(+) m6A CDS//exon       25683224//24981863//25569111 chr5:33026661-33026662(+) m6A CDS//exon       25683224//24981863//25569111 chr5:33026736-33026737(+) m6A CDS//exon       25683224//25456834//24981863//25569111 chr5:33026785-33026786(+) m6A CDS//exon       25683224//25456834//24981863//25569111 chr5:33026884-33026885(+) m6A CDS//exon       25683224//25456834//24981863//25569111 chr5:33027047-33027048(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:33027079-33027080(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:33027106-33027107(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:33027136-33027137(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:33027197-33027198(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr5:33027283-33027284(+) m6A 3'UTR       25683224//24981863//25569111 chr5:33027352-33027353(+) m6A 3'UTR       25683224//24981863//25569111 chr5:33027373-33027374(+) m6A 3'UTR       25683224//24981863//25569111 chr5:33027437-33027438(+) m6A 3'UTR       25683224//24981863//25569111 chr5:33027540-33027541(+) m6A 3'UTR       24981863//22608085 chr5:33027627-33027628(+) m6A 3'UTR       24981863//25456834//22608085 chr5:33027670-33027671(+) m6A 3'UTR       24981863//25456834//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Ywhah

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar