Basic Information:

  VIRBase ID:  

VHID00637953

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Rab23:  NM_008999     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Rab23
miRBase Accession/Entrez ID	MIMAT0001569	19335
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AW545388//opb//opb2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rab23	chr1:33719962-33719963(+) m6A 5'UTR//exon       24981863//25569111 chr1:33719990-33719991(+) m6A 5'UTR//exon       24981863//25569111 chr1:33720090-33720091(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr1:33720467-33720468(+) m6A 5'UTR//intron       25569111 chr1:33720555-33720556(+) m6A 5'UTR//intron       25569111 chr1:33720569-33720570(+) m6A 5'UTR//intron       25569111 chr1:33723796-33723797(+) m6A 5'UTR//exon       25683224//22608085 chr1:33723832-33723833(+) m6A 5'UTR//exon       25683224//22608085 chr1:33723959-33723960(+) m6A CDS//exon       24981863//22608085 chr1:33723970-33723971(+) m6A CDS//exon       24981863//22608085 chr1:33723983-33723984(+) m6A CDS//exon       24981863//22608085 chr1:33724915-33724916(+) m6A exon//intron       25412662 chr1:33724968-33724969(+) m6A 3'UTR//CDS//exon       25412662 chr1:33738321-33738322(+) m6A 3'UTR//CDS//exon       25569111 chr1:33738327-33738328(+) m6A 3'UTR//CDS//exon       25569111 chr1:33738351-33738352(+) m6A 3'UTR//CDS//exon       25569111 chr1:33739331-33739332(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:33739340-33739341(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:33739347-33739348(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:33739356-33739357(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:33739363-33739364(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:33739392-33739393(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:33739407-33739408(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:33739570-33739571(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:33739620-33739621(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:33739641-33739642(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:33739671-33739672(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:33739677-33739678(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:33739719-33739720(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:33739796-33739797(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:33739811-33739812(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:33739817-33739818(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:33739827-33739828(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:33739882-33739883(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:33739903-33739904(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr1:33740016-33740017(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr1:33740034-33740035(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr1:33740040-33740041(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr1:33740055-33740056(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr1:33740309-33740310(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr1:33740314-33740315(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr1:33740321-33740322(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr1:33740339-33740340(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr1:33740482-33740483(+) m6A 3'UTR//exon       25456834//24981863//25569111 chr1:33740520-33740521(+) m6A 3'UTR//exon       24981863//25569111 chr1:33740604-33740605(+) m6A 3'UTR//exon       24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Rab23

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar