Basic Information:

  VIRBase ID:  

VHID00637724

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Arhgef2:  NM_001198911     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Arhgef2
miRBase Accession/Entrez ID	MIMAT0001569	16800
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AA408978//GEF//GEF-H1//GEFH1//Lbc//Lbcl1//Lf//Lfc//LFP//LFP40//mKIAA0651//P4//P40

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arhgef2	chr3:88614447-88614448(+) m6A exon//intron       24981863//25412662 chr3:88614489-88614490(+) m6A exon//intron       24981863//25412662 chr3:88614606-88614607(+) m6A 5'UTR//exon       25412662//24981863 chr3:88615387-88615388(+) m6A 5'UTR//intron       24981863 chr3:88615451-88615452(+) m6A 5'UTR//intron       24981863 chr3:88615508-88615509(+) m6A 5'UTR//exon       24981863//25569111 chr3:88616228-88616229(+) m6A 5'UTR//intron       24981863//25569111 chr3:88616314-88616315(+) m6A 5'UTR//intron       24981863//25569111 chr3:88616328-88616329(+) m6A 5'UTR//intron       24981863//25569111 chr3:88616423-88616424(+) m6A 5'UTR//intron       24981863//25569111 chr3:88616566-88616567(+) m6A 5'UTR//exon       25683224//25569111 chr3:88616580-88616581(+) m6A 5'UTR//exon       25683224//25569111 chr3:88616588-88616589(+) m6A 5'UTR//exon       25683224//25569111 chr3:88616615-88616616(+) m6A 5'UTR//exon       25683224//25569111 chr3:88616649-88616650(+) m6A CDS//exon       25683224//25569111 chr3:88617266-88617267(+) m6A exon//intron       25683224//25569111 chr3:88617290-88617291(+) m6A exon//intron       25683224//25569111 chr3:88617301-88617302(+) m6A exon//intron       25569111 chr3:88621112-88621113(+) m6A 5'UTR//intron       24981863//25569111 chr3:88621127-88621128(+) m6A 5'UTR//intron       24981863//25569111 chr3:88621154-88621155(+) m6A 5'UTR//exon//intron       24981863//25569111 chr3:88621160-88621161(+) m6A 5'UTR//exon//intron       24981863//25569111 chr3:88621194-88621195(+) m6A 5'UTR//exon//intron       24981863//25569111 chr3:88621216-88621217(+) m6A 5'UTR//exon//intron       24981863//25569111 chr3:88621472-88621473(+) m6A 5'UTR//exon//intron       24981863 chr3:88621561-88621562(+) m6A 5'UTR//exon//intron       24981863 chr3:88629534-88629535(+) m6A CDS//exon//intron       25683224//24981863 chr3:88629591-88629592(+) m6A 5'UTR//intron       25683224//24981863 chr3:88629621-88629622(+) m6A 5'UTR//intron       25683224//24981863 chr3:88633331-88633332(+) m6A CDS//exon       25683224 chr3:88633336-88633337(+) m6A CDS//exon       25683224 chr3:88633375-88633376(+) m6A exon//intron       25683224 chr3:88633553-88633554(+) m6A CDS//exon       25683224//24981863 chr3:88633586-88633587(+) m6A CDS//exon       25683224//24981863 chr3:88634386-88634387(+) m6A exon//intron       25683224 chr3:88634420-88634421(+) m6A CDS//exon       25683224//25569111 chr3:88634441-88634442(+) m6A CDS//exon       25683224//25569111 chr3:88634539-88634540(+) m6A CDS//exon       25569111 chr3:88635060-88635061(+) Y CDS//exon       26075521 chr3:88635875-88635876(+) m6A CDS//exon       24981863//25569111 chr3:88635894-88635895(+) m6A CDS//exon       24981863//25569111 chr3:88635923-88635924(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr3:88635997-88635998(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr3:88636035-88636036(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr3:88636050-88636051(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr3:88636081-88636082(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr3:88636123-88636124(+) m6A exon//intron       25683224//25569111 chr3:88636168-88636169(+) m6A exon//intron       25569111 chr3:88636216-88636217(+) m6A exon//intron       25569111 chr3:88636238-88636239(+) m6A exon//intron       25569111 chr3:88639408-88639409(+) m6A CDS//exon       25412662 chr3:88639454-88639455(+) m6A CDS//exon       25412662 chr3:88640299-88640300(+) m6A CDS       25412662 chr3:88640316-88640317(+) m6A CDS       25412662 chr3:88643162-88643163(+) m6A CDS//exon       25569111 chr3:88643182-88643183(+) m6A CDS//exon       25569111 chr3:88643196-88643197(+) m6A CDS//exon       25569111 chr3:88643593-88643594(+) m6A CDS//exon       25683224//24981863//25412662//25569111 chr3:88643812-88643813(+) m6A CDS//exon       25683224//24981863//25412662//25569111 chr3:88644171-88644172(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr3:88646259-88646260(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr3:88646288-88646289(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr3:88646807-88646808(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88646821-88646822(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88646867-88646868(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88646904-88646905(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88646923-88646924(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88646934-88646935(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88646963-88646964(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88646990-88646991(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88646998-88646999(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88647554-88647555(+) m6A 3'UTR       24981863//25569111 chr3:88647572-88647573(+) m6A 3'UTR       24981863//25569111 chr3:88647615-88647616(+) m6A 3'UTR       24981863//25569111 chr3:88647660-88647661(+) m6A 3'UTR       24981863//25569111 chr3:88647670-88647671(+) m6A 3'UTR       25569111 chr3:88647802-88647803(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085 chr3:88647807-88647808(+) m6A 3'UTR       25683224//24981863//25456834//25569111//22608085 chr3:88647816-88647817(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111//22608085 chr3:88647888-88647889(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88647930-88647931(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88648024-88648025(+) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Arhgef2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar