Basic Information:

  VIRBase ID:  

VHID00637533

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-6-3p:  MIMAT0001569          Fgfr1:  NM_001079909     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-6-3p	Fgfr1
miRBase Accession/Entrez ID	MIMAT0001569	14182
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AW208770//bFGF-R-1//c-fgr//Ea//Eask//FGFR//Fgfr-//Fgfr-1//FGFR-I//FLG//Flt-//Flt-2//Fr//Fr1//Hs//Hspy//MFR

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Fgfr1	chr8:26675018(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Fgfr1	chr8:25564546(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fgfr1	chr8:25518866-25518867(+) m6A 5'UTR//intron       25683224//25456834//25412662//24981863//25569111 chr8:25518894-25518895(+) m6A 5'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111 chr8:25518932-25518933(+) m6A 5'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr8:25518937-25518938(+) m6A 5'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr8:25518943-25518944(+) m6A 5'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr8:25519018-25519019(+) m6A 5'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr8:25519025-25519026(+) m6A 5'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr8:25519102-25519103(+) m6A 5'UTR//exon//intron       25683224//25456834//25412662//24981863//25569111 chr8:25519179-25519180(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111 chr8:25519193-25519194(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111 chr8:25519318-25519319(+) m6A 5'UTR//exon//intron       25412662//25569111 chr8:25519368-25519369(+) m6A 5'UTR//exon//intron       25412662//25569111 chr8:25519374-25519375(+) m6A 5'UTR//exon//intron       25412662//25569111 chr8:25519411-25519412(+) m6A 5'UTR//exon//intron       25412662//25569111 chr8:25532268-25532269(+) m6A 5'UTR//exon       25683224//22608085 chr8:25532331-25532332(+) m6A 5'UTR//intron       25683224//22608085 chr8:25532423-25532424(+) m6A CDS//intron       25683224//22608085 chr8:25569715-25569716(+) m6A 3'UTR//CDS//exon       25683224//25412662//22608085 chr8:25569769-25569770(+) m6A exon//intron       25683224//25412662 chr8:25569835-25569836(+) m6A exon//intron       25683224//25412662 chr8:25570158-25570159(+) m6A 3'UTR//CDS//exon       25683224//25412662 chr8:25573197-25573198(+) m6A CDS//exon       - chr8:25573232-25573233(+) m6A CDS//exon       - chr8:25573562-25573563(+) m6A CDS//exon       25569111 chr8:25573590-25573591(+) m6A CDS//exon       25569111 chr8:25573616-25573617(+) m6A CDS//exon       25569111 chr8:25573622-25573623(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:25573754-25573755(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr8:25573772-25573773(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr8:25573829-25573830(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:25573905-25573906(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:25573907-25573908(+) Y CDS//exon       26075521 chr8:25573993-25573994(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:25574090-25574091(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:25574183-25574184(+) m6A 3'UTR//exon       25683224//25412662//24981863//25456834//25569111 chr8:25574189-25574190(+) m6A 3'UTR//exon       25683224//25412662//24981863//25456834//25569111 chr8:25574438-25574439(+) m6A 3'UTR//exon       25683224//24981863//25456834//25569111//22608085 chr8:25574452-25574453(+) m6A 3'UTR//exon       25683224//24981863//25456834//25569111//22608085 chr8:25574489-25574490(+) m6A 3'UTR//exon       25683224//24981863//25456834//25569111//22608085 chr8:25574521-25574522(+) m6A 3'UTR//exon       25683224//24981863//25456834//25569111//22608085 chr8:25574637-25574638(+) m6A 3'UTR//exon       25683224//24981863//25569111//22608085 chr8:25574645-25574646(+) m6A 3'UTR//exon       25683224//24981863//22608085 chr8:25574838-25574839(+) m6A 3'UTR       25412662 chr8:25574911-25574912(+) m6A 3'UTR       25412662 chr8:25574950-25574951(+) m6A 3'UTR       25412662 chr8:25574963-25574964(+) m6A 3'UTR       25412662 chr8:25575054-25575055(+) m6A 3'UTR       25412662 chr8:25575059-25575060(+) m6A 3'UTR       25412662 chr8:25575065-25575066(+) m6A 3'UTR       25412662 chr8:25575071-25575072(+) m6A 3'UTR       25412662 chr8:25575078-25575079(+) m6A 3'UTR       25412662

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-6-3p
Interactor2: Fgfr1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar