Basic Information:

  VIRBase ID:  

VHID00636928

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Erc2:  NM_177814     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Erc2
miRBase Accession/Entrez ID	MIMAT0001568	238988
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	6430531D06//CA//CAST//CAST1/ERC2//D14Ertd171//D14Ertd171e//ELKS//ELKS2alpha

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Erc2	chr14:27622588-27622589(+) m6A 5'UTR//exon       25683224//24981863 chr14:27623687-27623688(+) m6A 5'UTR//exon//intron       25683224 chr14:27652716-27652717(+) m6A 5'UTR//exon       24981863 chr14:27652758-27652759(+) m6A 5'UTR//exon       24981863//25569111 chr14:27652844-27652845(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr14:27652919-27652920(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr14:27652943-27652944(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27652952-27652953(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27653005-27653006(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27653060-27653061(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27653149-27653150(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27653256-27653257(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27653340-27653341(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27653347-27653348(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27653364-27653365(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr14:27653375-27653376(+) m6A CDS//exon       25683224//25456834//24981863//25412662//25569111//22608085 chr14:27653478-27653479(+) m6A CDS//exon       25683224//24981863//25412662 chr14:27776176-27776177(+) m6A CDS//exon//intron       24981863 chr14:27776867-27776868(+) m6A CDS//exon       24981863 chr14:27776877-27776878(+) m6A CDS//exon       24981863 chr14:27776952-27776953(+) m6A CDS//exon       25683224//25412662//24981863//22608085 chr14:27777014-27777015(+) m6A CDS//exon       25683224//25412662//24981863 chr14:27777044-27777045(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr14:27777052-27777053(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr14:27777207-27777208(+) m6A CDS//exon       24981863//25412662 chr14:27777225-27777226(+) m6A CDS//exon       24981863//25412662 chr14:27879707-27879708(+) m6A 3'UTR//exon//intron       24981863//22608085 chr14:27966449-27966450(+) m6A CDS//exon       24981863 chr14:27966454-27966455(+) m6A CDS//exon       24981863 chr14:27966465-27966466(+) m6A CDS//exon       24981863 chr14:27966485-27966486(+) m6A CDS//exon       24981863 chr14:28011642-28011643(+) m6A CDS//exon       24981863 chr14:28011652-28011653(+) m6A CDS//exon       25683224//24981863 chr14:28011669-28011670(+) m6A CDS//exon       25683224//24981863 chr14:28011693-28011694(+) m6A CDS//exon       25683224//24981863 chr14:28011713-28011714(+) m6A CDS//exon       25683224//24981863 chr14:28011732-28011733(+) m6A CDS//exon       25683224//24981863 chr14:28022014-28022015(+) m6A CDS       25683224//24981863 chr14:28022046-28022047(+) m6A CDS       24981863 chr14:28022052-28022053(+) m6A CDS       24981863 chr14:28040388-28040389(+) m6A CDS       24981863 chr14:28040398-28040399(+) m6A CDS       24981863 chr14:28040460-28040461(+) m6A CDS       25683224//24981863 chr14:28040511-28040512(+) m6A CDS       25683224//24981863 chr14:28040527-28040528(+) m6A CDS       25683224//24981863 chr14:28046445-28046446(+) m6A exon//intron       25683224//24981863 chr14:28141250-28141251(+) m6A CDS//exon       25412662 chr14:28141261-28141262(+) m6A CDS//exon       25412662 chr14:28271659-28271660(+) m6A CDS//exon       25683224//22608085 chr14:28271696-28271697(+) m6A CDS//exon       25683224//22608085 chr14:28302882-28302883(+) m6A CDS//exon       25683224//22608085 chr14:28302903-28302904(+) m6A CDS//exon       25683224//22608085 chr14:28302918-28302919(+) m6A CDS//exon       25683224//22608085 chr14:28475850-28475851(+) m6A 3'UTR//exon       25683224//24981863//26404942//22608085 chr14:28475971-28475972(+) m6A 3'UTR//exon       25683224//25456834//24981863//26404942//22608085 chr14:28476039-28476040(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr14:28476059-28476060(+) m6A 3'UTR//exon       25456834//24981863//26404942//22608085 chr14:28476115-28476116(+) m6A 3'UTR//exon       25456834//24981863//26404942//22608085 chr14:28476123-28476124(+) m6A 3'UTR//exon       25456834//24981863//26404942//22608085 chr14:28476178-28476179(+) m6A 3'UTR//exon       25456834//24981863//26404942//22608085 chr14:28476188-28476189(+) m6A 3'UTR//exon       25456834//24981863//26404942//22608085 chr14:28476248-28476249(+) m6A 3'UTR//exon       25683224//24981863//26404942//22608085 chr14:28476284-28476285(+) m6A 3'UTR//exon       25683224//24981863//26404942//22608085 chr14:28476413-28476414(+) m6A 3'UTR//exon       24981863 chr14:28476651-28476652(+) m6A 3'UTR//exon       24981863 chr14:28476720-28476721(+) m6A 3'UTR//exon       24981863//26404942 chr14:28476758-28476759(+) m6A 3'UTR//exon       24981863//26404942 chr14:28476864-28476865(+) m6A 3'UTR//exon       24981863 chr14:28476930-28476931(+) m6A 3'UTR//exon       24981863//26404942 chr14:28476960-28476961(+) m6A 3'UTR//exon       24981863//26404942 chr14:28477109-28477110(+) m6A 3'UTR//exon       24981863//26404942//22608085 chr14:28477142-28477143(+) m6A 3'UTR//exon       24981863//26404942//22608085 chr14:28477171-28477172(+) m6A 3'UTR//exon       24981863//26404942//22608085 chr14:28477512-28477513(+) m6A 3'UTR//exon       26404942 chr14:28477741-28477742(+) m6A 3'UTR//exon       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Erc2	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Erc2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar