Basic Information:

  VIRBase ID:  

VHID00636893

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Smg1:  NM_001031814     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Smg1
miRBase Accession/Entrez ID	MIMAT0001568	233789
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2610207I05Rik//5430435M13Rik//C130002K18Rik//mKIAA0421

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Smg1	chr7:118134447-118134448(-) m6A 3'UTR       - chr7:118134463-118134464(-) m6A 3'UTR       - chr7:118134598-118134599(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:118134741-118134742(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:118134768-118134769(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:118134774-118134775(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:118134807-118134808(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118134840-118134841(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118134950-118134951(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118134970-118134971(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118134998-118134999(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118135079-118135080(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:118135122-118135123(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:118135148-118135149(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:118135165-118135166(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr7:118135204-118135205(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr7:118135275-118135276(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:118135374-118135375(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:118135415-118135416(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr7:118135500-118135501(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr7:118135531-118135532(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr7:118135554-118135555(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111 chr7:118135819-118135820(-) m6A exon//intron       25412662//22608085 chr7:118136710-118136711(-) m6A 3'UTR//CDS       25412662//22608085 chr7:118136776-118136777(-) m6A 3'UTR//CDS       25412662//22608085 chr7:118136882-118136883(-) m6A 3'UTR//CDS       25412662//22608085 chr7:118136890-118136891(-) m6A 3'UTR//CDS       25412662//22608085 chr7:118136933-118136934(-) m6A 3'UTR//CDS       25412662//22608085 chr7:118140494-118140495(-) m6A 3'UTR//CDS       24981863//25569111//22608085 chr7:118140524-118140525(-) m6A 3'UTR//CDS       24981863//25569111 chr7:118140536-118140537(-) m6A 3'UTR//CDS       24981863//25569111 chr7:118140560-118140561(-) m6A 3'UTR//CDS       24981863//25569111 chr7:118140600-118140601(-) m6A 3'UTR//CDS       24981863//22608085 chr7:118141723-118141724(-) m6A 3'UTR//CDS       25569111//22608085 chr7:118141866-118141867(-) m6A 3'UTR//CDS       25412662//22608085 chr7:118143362-118143363(-) m6A 3'UTR//CDS       25569111//22608085 chr7:118143378-118143379(-) m6A 3'UTR//CDS       25569111//22608085 chr7:118145371-118145372(-) m6A 3'UTR//CDS       25569111 chr7:118145392-118145393(-) m6A 3'UTR//CDS       25569111 chr7:118145463-118145464(-) m6A 3'UTR//CDS       24981863//25456834//25569111 chr7:118145559-118145560(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118145624-118145625(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118145637-118145638(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118145645-118145646(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118145660-118145661(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118145706-118145707(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118145737-118145738(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr7:118145762-118145763(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr7:118145976-118145977(-) m6A 3'UTR//CDS       25456834//24981863//25569111 chr7:118146018-118146019(-) m6A 3'UTR//CDS       25569111 chr7:118146025-118146026(-) m6A 3'UTR//CDS       25569111 chr7:118146152-118146153(-) m6A 3'UTR//CDS       25569111//22608085 chr7:118148761-118148762(-) m6A 3'UTR//CDS       25569111//22608085 chr7:118148774-118148775(-) m6A 3'UTR//CDS       25569111//22608085 chr7:118148787-118148788(-) m6A 3'UTR//CDS       25569111//22608085 chr7:118148821-118148822(-) m6A 3'UTR//CDS       25569111//22608085 chr7:118148845-118148846(-) m6A 3'UTR//CDS       25569111//22608085 chr7:118154182-118154183(-) m6A 3'UTR//CDS       22608085 chr7:118154242-118154243(-) m6A 3'UTR//CDS       22608085 chr7:118154254-118154255(-) m6A 3'UTR//CDS       22608085 chr7:118158041-118158042(-) m6A 3'UTR//CDS//exon       25683224 chr7:118163208-118163209(-) m6A 3'UTR//CDS       24981863//22608085 chr7:118163270-118163271(-) m6A 3'UTR//CDS       25412662//22608085 chr7:118165987-118165988(-) m6A 3'UTR//CDS       25412662//24981863//22608085 chr7:118168163-118168164(-) m6A 3'UTR//CDS       22608085 chr7:118168216-118168217(-) m6A 3'UTR//CDS       22608085 chr7:118173154-118173155(-) m6A 3'UTR//CDS       24981863//22608085 chr7:118173170-118173171(-) m6A 3'UTR//CDS       24981863//22608085 chr7:118173207-118173208(-) m6A 3'UTR//CDS       24981863//22608085 chr7:118173296-118173297(-) m6A 3'UTR//CDS       24981863//22608085 chr7:118212436-118212437(-) m6A CDS//exon//intron       25683224//22608085 chr7:118212973-118212974(-) m6A CDS//exon       25683224//22608085 chr7:118243447-118243448(-) m6A 5'UTR//exon       25412662//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Smg1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar