Basic Information:

  VIRBase ID:  

VHID00636821

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Ppig:  NM_001081086     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Ppig
miRBase Accession/Entrez ID	MIMAT0001568	228005
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AU019516//AU022200//B230312B02Rik//CYP//D5Mgi1//SR//SRCyp

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ppig	chr2:69722921-69722922(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr2:69723129-69723130(+) m6A 5'UTR//intron       25412662 chr2:69723559-69723560(+) m6A exon//intron       25569111 chr2:69723570-69723571(+) m6A exon//intron       25569111 chr2:69732949-69732950(+) m6A exon//intron       25683224//22608085 chr2:69732970-69732971(+) m6A exon//intron       25683224//22608085 chr2:69741545-69741546(+) m6A CDS//exon       24981863//22608085 chr2:69741630-69741631(+) m6A CDS       25412662//24981863 chr2:69743752-69743753(+) m6A CDS//exon       24981863 chr2:69746108-69746109(+) m6A CDS//exon       25683224//25412662//24981863 chr2:69748969-69748970(+) m6A CDS//intron       25683224//25412662//24981863 chr2:69749014-69749015(+) m6A CDS//exon       25683224//25412662//24981863 chr2:69749031-69749032(+) m6A CDS//exon       25683224//25412662//24981863 chr2:69749346-69749347(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:69749366-69749367(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:69749399-69749400(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:69749426-69749427(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:69749468-69749469(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:69749540-69749541(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:69749556-69749557(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:69749564-69749565(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:69749605-69749606(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:69749625-69749626(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:69749675-69749676(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:69749682-69749683(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:69749706-69749707(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:69749784-69749785(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:69749803-69749804(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:69749828-69749829(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:69749904-69749905(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:69749988-69749989(+) m1A CDS       26863196 chr2:69750035-69750036(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:69750190-69750191(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:69750209-69750210(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:69750256-69750257(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:69750281-69750282(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:69750358-69750359(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:69750368-69750369(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:69750433-69750434(+) m6A 3'UTR       25456834//24981863//25569111 chr2:69750445-69750446(+) m6A 3'UTR       25456834//24981863//25569111 chr2:69750526-69750527(+) m6A 3'UTR       25456834//24981863//25569111 chr2:69753625-69753626(+) Y 3'UTR//exon       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ppig	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Ppig

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar