Basic Information:

  VIRBase ID:  

VHID00636713

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Tnrc6b:  NM_177124     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Tnrc6b
miRBase Accession/Entrez ID	MIMAT0001568	213988
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2700090M07Rik//A730065C02Rik//AI848765//D230019K20Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tnrc6b	chr15:80711425-80711426(+) m6A 5'UTR       25569111 chr15:80759591-80759592(+) m6A CDS       25683224//25412662//24981863 chr15:80784743-80784744(+) m6A CDS       25683224//25412662//24981863 chr15:80784777-80784778(+) m6A CDS       25683224//25412662//24981863 chr15:80784803-80784804(+) m6A CDS       25683224//25412662//24981863//25456834 chr15:80858704-80858705(+) m6A CDS       25683224//25412662//24981863//25456834 chr15:80858718-80858719(+) m6A CDS       25683224//25412662//24981863//25456834 chr15:80864392-80864393(+) m6A CDS       25683224//25412662//24981863//25456834 chr15:80864399-80864400(+) m6A CDS       25683224//25412662//24981863//25456834 chr15:80876332-80876333(+) m6A CDS       25683224//25412662//24981863 chr15:80876434-80876435(+) m6A CDS       24981863 chr15:80876499-80876500(+) m6A CDS       24981863 chr15:80876598-80876599(+) m6A CDS       25683224//25412662//22608085 chr15:80876651-80876652(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:80878971-80878972(+) m6A CDS       25683224//24981863//25569111 chr15:80879028-80879029(+) m6A CDS       25683224//24981863//25569111 chr15:80879049-80879050(+) m6A CDS       25683224//24981863//25569111 chr15:80879076-80879077(+) m6A CDS       25683224//24981863//25569111 chr15:80879248-80879249(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879256-80879257(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879290-80879291(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879363-80879364(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879387-80879388(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879443-80879444(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:80879497-80879498(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:80879524-80879525(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:80879538-80879539(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:80879553-80879554(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879568-80879569(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879613-80879614(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879663-80879664(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879708-80879709(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879725-80879726(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879751-80879752(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879763-80879764(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879772-80879773(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80879800-80879801(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80879829-80879830(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80879862-80879863(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80879877-80879878(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80879907-80879908(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80879944-80879945(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80879994-80879995(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80880024-80880025(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80880054-80880055(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80880224-80880225(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880239-80880240(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880249-80880250(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880267-80880268(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880284-80880285(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880300-80880301(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880356-80880357(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880386-80880387(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880393-80880394(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880480-80880481(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80880516-80880517(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880560-80880561(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880635-80880636(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80880736-80880737(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:80880752-80880753(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:80880777-80880778(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:80880833-80880834(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:80880841-80880842(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:80880862-80880863(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:80880982-80880983(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:80881012-80881013(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:80881062-80881063(+) m6A CDS       25683224//25456834//24981863//25569111 chr15:80881092-80881093(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:80881122-80881123(+) m6A CDS       25683224//24981863//25569111//22608085 chr15:80881165-80881166(+) m6A CDS       25683224//24981863//25569111 chr15:80881170-80881171(+) m6A CDS       25683224//24981863//25569111 chr15:80882981-80882982(+) m6A CDS       25683224//25569111 chr15:80883066-80883067(+) m6A CDS       25683224//25412662//22608085 chr15:80883097-80883098(+) m6A CDS       25683224//25412662//22608085 chr15:80884246-80884247(+) m6A CDS       25683224//25412662//22608085 chr15:80884305-80884306(+) m6A CDS       25683224//25412662//22608085 chr15:80884357-80884358(+) m6A CDS       25683224//25412662//22608085 chr15:80884372-80884373(+) m6A CDS       25683224//25412662//22608085 chr15:80886977-80886978(+) m6A CDS       25412662//22608085 chr15:80887008-80887009(+) m6A CDS       25412662//22608085 chr15:80889036-80889037(+) m6A CDS       25683224//22608085 chr15:80889044-80889045(+) m6A CDS       25683224//22608085 chr15:80889117-80889118(+) m6A CDS       25683224//22608085 chr15:80889125-80889126(+) m6A CDS       25683224//22608085 chr15:80889132-80889133(+) m6A CDS       25683224//22608085 chr15:80902673-80902674(+) m6A CDS       25683224//22608085 chr15:80913325-80913326(+) m6A CDS       25683224//22608085 chr15:80913357-80913358(+) m6A CDS       25683224//22608085 chr15:80913374-80913375(+) m6A CDS       25683224//22608085 chr15:80913381-80913382(+) m6A CDS       25683224//22608085 chr15:80923503-80923504(+) m6A CDS       24981863 chr15:80923559-80923560(+) m6A CDS       24981863 chr15:80923605-80923606(+) m6A CDS       25683224//24981863 chr15:80923657-80923658(+) m6A CDS       25683224//24981863 chr15:80923664-80923665(+) m6A CDS       25683224 chr15:80927663-80927664(+) m6A CDS       25683224 chr15:80929224-80929225(+) m6A CDS       25683224//25412662//24981863//25569111 chr15:80929234-80929235(+) m6A CDS       25683224//25412662//24981863//25569111 chr15:80929243-80929244(+) m6A CDS       25683224//25412662//24981863//25569111 chr15:80929253-80929254(+) m6A CDS       25683224//25412662//24981863//25569111 chr15:80929264-80929265(+) m6A CDS       25683224//25412662//24981863//25569111 chr15:80929363-80929364(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80929476-80929477(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80929482-80929483(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:80929515-80929516(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr15:80929625-80929626(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80929656-80929657(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:80929696-80929697(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:80929743-80929744(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:80929780-80929781(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:80929853-80929854(+) m6A 3'UTR       25456834 chr15:80930580-80930581(+) m6A 3'UTR       25683224//25412662//22608085 chr15:80930613-80930614(+) m6A 3'UTR       25683224//22608085 chr15:80930663-80930664(+) m6A 3'UTR       25683224 chr15:80931687-80931688(+) m6A 3'UTR       25412662 chr15:80931822-80931823(+) m6A 3'UTR       25412662//24981863 chr15:80933053-80933054(+) m6A 3'UTR       25683224 chr15:80934456-80934457(+) m6A 3'UTR       24981863 chr15:80934461-80934462(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Tnrc6b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar