Basic Information:

  VIRBase ID:  

VHID00636416

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Slc10a7:  NM_029736     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Slc10a7
miRBase Accession/Entrez ID	MIMAT0001568	76775
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2410193C02Rik//P7

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slc10a7	chr8:78509541-78509542(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr8:78509549-78509550(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr8:78509554-78509555(+) m6A 5'UTR//exon       24981863//25569111 chr8:78604434-78604435(+) m6A intron       25569111 chr8:78604487-78604488(+) m6A intron       25569111 chr8:78604508-78604509(+) m6A intron       25569111 chr8:78604530-78604531(+) m6A intron       25569111 chr8:78604591-78604592(+) m6A intron       24981863//25569111 chr8:78604672-78604673(+) m6A intron       24981863//25569111 chr8:78731819-78731820(+) m6A 3'UTR//exon       24981863 chr8:78731862-78731863(+) m6A 3'UTR//exon       24981863 chr8:78731906-78731907(+) m6A 3'UTR//exon       25456834//24981863//25569111 chr8:78731951-78731952(+) m6A 3'UTR//exon       25456834//25412662//24981863//25569111 chr8:78731998-78731999(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr8:78732081-78732082(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr8:78732202-78732203(+) m6A 3'UTR//exon//intron       25456834//25412662//24981863//25569111//22608085 chr8:78732313-78732314(+) m6A 3'UTR//exon//intron       25683224//25456834//24981863//25569111//22608085 chr8:78732319-78732320(+) m6A 3'UTR//exon//intron       25683224//25456834//24981863//25569111//22608085 chr8:78732539-78732540(+) m6A 3'UTR//exon       24981863//25569111 chr8:78732569-78732570(+) m6A 3'UTR//exon       24981863//25569111 chr8:78732660-78732661(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111 chr8:78732745-78732746(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:78732785-78732786(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:78732808-78732809(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:78732830-78732831(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:78732836-78732837(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:78732861-78732862(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:78732906-78732907(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:78732963-78732964(+) m6A 3'UTR//exon       25683224//25412662//24981863//25569111 chr8:78733129-78733130(+) m6A 3'UTR//exon       24981863//25569111 chr8:78733203-78733204(+) m6A 3'UTR//exon       25456834//25412662//24981863//25569111 chr8:78733315-78733316(+) m6A 3'UTR//exon       25412662 chr8:78733363-78733364(+) m6A 3'UTR//exon       25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Slc10a7	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Slc10a7

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar