Detail Information

Basic Information:


  VIRBase ID:  

VHID00636390

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:           Nhej1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-5-5p Nhej1
miRBase
Accession/Entrez ID
MIMAT0001568 75570
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 1700029B21Rik//cer//cernunnos//XL//XLF

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Nhej1
chr1:74967417-74967418(-) m6A 3'UTR       25456834//24981863//22608085
chr1:74967461-74967462(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:74967479-74967480(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr1:74967569-74967570(-) m6A 3'UTR       25683224//25456834//25412662//24981863//22608085
chr1:74967658-74967659(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr1:74967705-74967706(-) m6A CDS       25683224//24981863
chr1:74980715-74980716(-) Y intron       26075521

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-5-5p
Interactor2: Nhej1

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

Starting a new search, please wait ...