Detail Information

Basic Information:


  VIRBase ID:  

VHID00636376

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:           Mdga1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-5-5p Mdga1
miRBase
Accession/Entrez ID		 MIMAT0001568 74762
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 1200011I03Rik//GPIM//Mamdc//Mamdc3

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Mdga1
chr17:29828143-29828144(-) m6A 3'UTR       25683224
chr17:29828231-29828232(-) m6A 3'UTR       25683224
chr17:29828257-29828258(-) m6A 3'UTR       25683224
chr17:29828271-29828272(-) m6A 3'UTR       25683224
chr17:29828539-29828540(-) m6A 3'UTR       24981863
chr17:29828576-29828577(-) m6A 3'UTR       24981863
chr17:29828586-29828587(-) m6A 3'UTR       24981863
chr17:29828782-29828783(-) m6A 3'UTR       24981863//22608085
chr17:29828830-29828831(-) m6A 3'UTR       25683224//24981863//22608085
chr17:29828843-29828844(-) m6A 3'UTR       25683224//24981863//22608085
chr17:29828876-29828877(-) m6A 3'UTR       25683224//24981863//22608085
chr17:29828895-29828896(-) m6A 3'UTR       24981863//22608085
chr17:29828988-29828989(-) m6A 3'UTR       24981863//22608085
chr17:29829010-29829011(-) m6A 3'UTR       24981863//22608085
chr17:29829025-29829026(-) m6A 3'UTR       24981863//22608085
chr17:29829032-29829033(-) m6A 3'UTR       24981863//22608085
chr17:29829068-29829069(-) m6A 3'UTR       24981863//22608085
chr17:29829151-29829152(-) m6A 3'UTR       24981863//22608085
chr17:29829164-29829165(-) m6A 3'UTR       24981863//22608085
chr17:29829187-29829188(-) m6A 3'UTR       24981863//22608085
chr17:29829273-29829274(-) m6A 3'UTR       24981863//22608085
chr17:29829337-29829338(-) m6A 3'UTR       24981863//22608085
chr17:29829349-29829350(-) m6A 3'UTR       24981863//22608085
chr17:29831349-29831350(-) m6A 3'UTR       24981863
chr17:29831364-29831365(-) m6A 3'UTR       24981863
chr17:29831432-29831433(-) m6A 3'UTR       24981863
chr17:29831541-29831542(-) m6A 3'UTR       24981863
chr17:29831551-29831552(-) m6A 3'UTR       24981863
chr17:29831619-29831620(-) m6A 3'UTR       24981863//22608085
chr17:29831695-29831696(-) m6A 3'UTR       25456834//25412662//24981863//22608085
chr17:29831734-29831735(-) m6A 3'UTR       25683224//25456834//25412662//24981863//22608085
chr17:29831802-29831803(-) m6A 3'UTR       25456834//25412662//24981863//22608085
chr17:29831853-29831854(-) m6A 3'UTR       25456834//25412662//24981863//22608085
chr17:29831905-29831906(-) m6A 3'UTR       25456834//25412662//24981863//22608085
chr17:29831971-29831972(-) m6A 3'UTR       25456834//24981863//22608085
chr17:29831989-29831990(-) m6A 3'UTR       25456834//24981863//22608085
chr17:29832021-29832022(-) m6A 3'UTR       25456834//24981863//22608085
chr17:29832149-29832150(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//22608085
chr17:29832155-29832156(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//22608085
chr17:29832240-29832241(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//22608085
chr17:29842232-29842233(-) m6A CDS//exon       25412662
chr17:29842278-29842279(-) m6A CDS//exon       25412662
chr17:29846323-29846324(-) m6A CDS       25456834//24981863
chr17:29846529-29846530(-) m6A CDS       25456834//25412662//24981863
chr17:29846577-29846578(-) m6A CDS       25683224//25456834//25412662
chr17:29846595-29846596(-) m6A CDS       25683224//25456834
chr17:29849177-29849178(-) m6A CDS       25456834
chr17:29849304-29849305(-) m6A CDS       25412662
chr17:29849380-29849381(-) m6A CDS       25412662
chr17:29849393-29849394(-) m6A CDS       25412662
chr17:29852549-29852550(-) m6A CDS//exon       25683224//25412662
chr17:29852581-29852582(-) m6A CDS//exon       25683224//25412662
chr17:29852600-29852601(-) m6A CDS//exon       25412662
chr17:29852606-29852607(-) m6A CDS//exon       25412662
chr17:29857604-29857605(-) m6A CDS//exon       25412662
chr17:29887656-29887657(-) m6A 5'UTR//CDS//intron       25412662//24981863
chr17:29887682-29887683(-) m6A 5'UTR//CDS//intron       25412662//24981863
chr17:29887805-29887806(-) m6A 5'UTR//CDS//intron       25456834//25412662//24981863//25569111//22608085
chr17:29887812-29887813(-) m6A 5'UTR//intron       25456834//25412662//24981863//25569111//22608085
chr17:29887824-29887825(-) m6A 5'UTR//intron       25683224//25412662//24981863//25569111//22608085
chr17:29887911-29887912(-) m6A 5'UTR//intron       25412662//24981863//22608085
chr17:29887994-29887995(-) m6A 5'UTR//intron       25412662//24981863//22608085
chr17:29888076-29888077(-) m6A 5'UTR//intron       25412662//24981863
chr17:29888082-29888083(-) m6A 5'UTR//intron       25412662//24981863
chr17:29888114-29888115(-) m6A 5'UTR//intron       25412662//24981863
chr17:29888140-29888141(-) m6A 5'UTR//intron       25412662//24981863
chr17:29888148-29888149(-) m6A 5'UTR//intron       25456834//25412662//24981863
chr17:29888231-29888232(-) m6A 5'UTR//intron       25456834//25412662//24981863//22608085
chr17:29888275-29888276(-) m6A 5'UTR//intron       25456834//25412662//24981863//22608085
chr17:29888281-29888282(-) m6A 5'UTR//intron       25456834//25412662//24981863//22608085

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-5-5p
Interactor2: Mdga1

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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