Basic Information:

  VIRBase ID:  

VHID00636211

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Zc3h15:  NM_026934     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Zc3h15
miRBase Accession/Entrez ID	MIMAT0001568	69082
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1700006A17Rik//1810012H02Rik//2610312B22Rik//FM22//Ier//Ierepo4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zc3h15	chr2:83644666-83644667(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr2:83644706-83644707(+) m1A CDS//exon       26863196 chr2:83653363-83653364(+) m6A CDS//exon       25412662//24981863//25569111 chr2:83653371-83653372(+) m6A CDS//exon       25412662//24981863//25569111 chr2:83656973-83656974(+) m6A exon//intron       24981863 chr2:83657068-83657069(+) m6A CDS//exon//intron       24981863 chr2:83657095-83657096(+) m6A CDS//exon//intron       24981863 chr2:83658045-83658046(+) m6A CDS//exon       24981863 chr2:83658051-83658052(+) m6A CDS//exon       24981863 chr2:83658150-83658151(+) m6A CDS//exon       25412662//24981863 chr2:83658266-83658267(+) m6A exon//intron       24981863 chr2:83658574-83658575(+) m6A CDS//exon       24981863 chr2:83658605-83658606(+) m6A CDS//exon//intron       24981863 chr2:83658612-83658613(+) m6A CDS//exon//intron       24981863 chr2:83660065-83660066(+) m6A CDS//exon       24981863 chr2:83660130-83660131(+) m6A CDS//exon       24981863 chr2:83660181-83660182(+) m6A CDS//exon       25412662//24981863 chr2:83661217-83661218(+) m6A CDS//exon       25412662//24981863//22608085 chr2:83661235-83661236(+) m6A CDS//exon       25412662//24981863//22608085 chr2:83661241-83661242(+) m6A CDS//exon       25412662//24981863 chr2:83661519-83661520(+) m6A CDS//exon       24981863 chr2:83662214-83662215(+) m6A CDS//exon       25683224//24981863 chr2:83662263-83662264(+) m6A CDS//exon       25683224//24981863 chr2:83663822-83663823(+) m6A CDS//exon       25683224//24981863 chr2:83663885-83663886(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:83663901-83663902(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:83663942-83663943(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:83663970-83663971(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:83663987-83663988(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:83664021-83664022(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:83664050-83664051(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:83664329-83664330(+) m6A 3'UTR//exon       24981863//25569111//22608085 chr2:83664349-83664350(+) m6A 3'UTR//exon       24981863//25569111//22608085 chr2:83664414-83664415(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr2:83664451-83664452(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:83664486-83664487(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:83664498-83664499(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:83664512-83664513(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:83664600-83664601(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Zc3h15	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Zc3h15

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar