Basic Information:

  VIRBase ID:  

VHID00636127

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Lsm1:  NM_026032     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Lsm1
miRBase Accession/Entrez ID	MIMAT0001568	67207
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2810025O06Rik//CASM

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Lsm1	chr8:25785431-25785432(+) m6A 5'UTR       25683224//25412662//25569111 chr8:25785669-25785670(+) m6A 5'UTR//exon       24981863//25569111 chr8:25785675-25785676(+) m6A CDS//exon       25569111 chr8:25785708-25785709(+) m6A CDS//exon       25569111//22608085 chr8:25792188-25792189(+) m6A CDS//exon//intron       25569111//22608085 chr8:25793801-25793802(+) m6A exon//intron       25412662//22608085 chr8:25793809-25793810(+) m6A exon//intron       25412662//22608085 chr8:25794115-25794116(+) m6A exon//intron       25412662 chr8:25801989-25801990(+) m6A 3'UTR//CDS       25412662//24981863 chr8:25802008-25802009(+) m6A 3'UTR//CDS       25412662//24981863 chr8:25802013-25802014(+) m6A 3'UTR//CDS       25412662//24981863 chr8:25802041-25802042(+) m6A 3'UTR//CDS       24981863//25412662 chr8:25802078-25802079(+) m6A 3'UTR//CDS       24981863//25412662//25569111 chr8:25802112-25802113(+) m6A 3'UTR       24981863//25569111 chr8:25802239-25802240(+) m6A 3'UTR       24981863//25569111 chr8:25802320-25802321(+) m6A 3'UTR       24981863//25569111//22608085 chr8:25802345-25802346(+) m6A 3'UTR       24981863//25569111//22608085 chr8:25802394-25802395(+) m6A 3'UTR       24981863//25569111//22608085 chr8:25802438-25802439(+) m6A 3'UTR       24981863//25569111//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Lsm1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar