Basic Information:

  VIRBase ID:  

VHID00636122

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Mtdh:  NM_001357925     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Mtdh
miRBase Accession/Entrez ID	MIMAT0001568	67154
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2610103J23Rik//3D3//3D3/Ly//3D3/Lyric//AEG-//AEG-1//AV353288//D8Bwg1112e//Ly//Lyric

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mtdh	chr15:34082743-34082744(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr15:34082796-34082797(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr15:34082857-34082858(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr15:34082864-34082865(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr15:34083234-34083235(+) Y CDS//exon       26075521 chr15:34083384-34083385(+) m6A CDS//exon       25683224//25412662//24981863 chr15:34083917-34083918(+) m6A exon//intron       25683224//24981863 chr15:34083976-34083977(+) m6A exon//intron       24981863 chr15:34084029-34084030(+) m6A exon//intron       24981863 chr15:34099495-34099496(+) m6A CDS//exon       24981863 chr15:34099551-34099552(+) m6A CDS//exon       24981863 chr15:34099564-34099565(+) m6A CDS//exon       24981863 chr15:34099684-34099685(+) m6A exon//intron       24981863 chr15:34114072-34114073(+) m6A CDS//exon//intron       24981863 chr15:34114154-34114155(+) m6A exon//intron       24981863 chr15:34114740-34114741(+) m6A exon//intron       24981863 chr15:34114809-34114810(+) m6A CDS//exon//intron       24981863 chr15:34117317-34117318(+) m6A exon//intron       24981863 chr15:34117943-34117944(+) m6A 3'UTR//CDS//exon       25412662//24981863//25569111 chr15:34117975-34117976(+) m6A 3'UTR//CDS//exon       25412662//24981863//25569111 chr15:34118010-34118011(+) m6A 3'UTR//CDS//exon       25412662//24981863//25569111 chr15:34118028-34118029(+) m6A 3'UTR//CDS//exon       25412662//24981863//25569111 chr15:34118035-34118036(+) m6A 3'UTR//CDS//exon       25412662//24981863//25569111 chr15:34118065-34118066(+) m6A 3'UTR//CDS//exon       25412662//24981863//25569111 chr15:34121467-34121468(+) m6A CDS//intron       25412662//22608085 chr15:34131193-34131194(+) m6A 3'UTR//CDS       25683224//25412662 chr15:34131223-34131224(+) m6A 3'UTR//CDS       25683224//25412662 chr15:34131266-34131267(+) m6A 3'UTR//CDS       25683224//25412662 chr15:34133491-34133492(+) m6A exon//intron       25683224//25412662 chr15:34133596-34133597(+) m6A exon//intron       25683224//25412662 chr15:34136696-34136697(+) m6A CDS//exon       25683224//25412662//24981863 chr15:34136708-34136709(+) m6A CDS//exon       25683224//25412662//24981863 chr15:34136754-34136755(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr15:34136779-34136780(+) m6A CDS//exon       25683224//24981863//25569111 chr15:34139749-34139750(+) m6A CDS//exon       24981863//25569111 chr15:34139843-34139844(+) m6A CDS//exon       24981863//25569111 chr15:34139849-34139850(+) m6A CDS//exon       24981863//25569111 chr15:34139876-34139877(+) m6A CDS//exon       24981863//25569111 chr15:34140702-34140703(+) m6A CDS//exon       24981863//25569111//22608085 chr15:34140722-34140723(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr15:34140782-34140783(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr15:34140796-34140797(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr15:34140838-34140839(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085 chr15:34140866-34140867(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085 chr15:34140879-34140880(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085 chr15:34140884-34140885(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085 chr15:34140889-34140890(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085 chr15:34140968-34140969(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr15:34141016-34141017(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr15:34141057-34141058(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr15:34141166-34141167(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr15:34141310-34141311(+) m6A 3'UTR       25569111 chr15:34141355-34141356(+) m6A 3'UTR       25569111 chr15:34141378-34141379(+) m6A 3'UTR       25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Mtdh

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar