Basic Information:

  VIRBase ID:  

VHID00635958

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Col5a3:  NM_016919     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Col5a3
miRBase Accession/Entrez ID	MIMAT0001568	53867
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Col5a3	chr9:20770746-20770747(-) m6A 3'UTR       25683224//25569111 chr9:20770861-20770862(-) m6A CDS       25683224//25569111 chr9:20770880-20770881(-) m6A CDS       25683224//25569111 chr9:20771649-20771650(-) m6A CDS       25683224//25412662 chr9:20772123-20772124(-) m6A CDS       25683224//25412662 chr9:20772139-20772140(-) m6A CDS       25683224//25412662 chr9:20772377-20772378(-) m6A CDS       25683224//25412662 chr9:20772453-20772454(-) m6A CDS       25683224//25412662 chr9:20773108-20773109(-) m6A CDS       25683224//25412662 chr9:20773115-20773116(-) m6A CDS       25683224//25412662 chr9:20773917-20773918(-) m6A CDS       25412662 chr9:20775063-20775064(-) m6A CDS       25412662 chr9:20775078-20775079(-) m6A CDS       25412662 chr9:20775306-20775307(-) m6A CDS       25412662 chr9:20775319-20775320(-) m6A CDS       25412662 chr9:20775863-20775864(-) m6A CDS       25412662 chr9:20776094-20776095(-) m6A CDS       25412662 chr9:20776325-20776326(-) m6A CDS       25683224//25412662 chr9:20776354-20776355(-) m6A CDS       25683224//25412662 chr9:20776995-20776996(-) m6A CDS       25683224//25412662 chr9:20777024-20777025(-) m6A CDS       25683224//25412662 chr9:20778500-20778501(-) m6A CDS       25683224//25412662 chr9:20778688-20778689(-) m6A CDS       25412662 chr9:20781849-20781850(-) m6A CDS       25683224//25412662 chr9:20782628-20782629(-) m6A CDS       25683224//25412662 chr9:20782684-20782685(-) m6A CDS       25683224//25412662 chr9:20782798-20782799(-) m6A exon//intron       25683224//25412662 chr9:20784719-20784720(-) m6A CDS//exon       25683224//25412662 chr9:20785149-20785150(-) m6A CDS//exon       25683224//25412662 chr9:20785223-20785224(-) m6A CDS//exon       25412662 chr9:20785411-20785412(-) m6A CDS//exon       25412662 chr9:20785423-20785424(-) m6A CDS//exon       25412662 chr9:20785596-20785597(-) m6A CDS//exon       25683224//25412662 chr9:20786213-20786214(-) m6A CDS//exon       25683224//25412662 chr9:20786365-20786366(-) m6A CDS//exon       25683224//25412662 chr9:20787293-20787294(-) m6A CDS//exon       25683224//25412662 chr9:20787300-20787301(-) m6A CDS//exon       25683224//25412662 chr9:20787563-20787564(-) m6A CDS//exon       25683224//25412662 chr9:20788574-20788575(-) m6A CDS//exon       25683224//25412662 chr9:20788583-20788584(-) m6A CDS//exon       25683224//25412662 chr9:20792650-20792651(-) m6A CDS//exon       25683224//25412662 chr9:20793551-20793552(-) m6A CDS//exon       25683224//25412662 chr9:20793569-20793570(-) m6A CDS//exon       25683224//25412662 chr9:20793605-20793606(-) m6A CDS//exon       25683224//25412662 chr9:20793612-20793613(-) m6A CDS//exon       25683224//25412662 chr9:20793725-20793726(-) m6A CDS//exon       25683224//25412662 chr9:20795671-20795672(-) m6A CDS//exon       25683224//25412662 chr9:20795989-20795990(-) m6A CDS//exon       25412662 chr9:20797395-20797396(-) m6A CDS//exon       25412662 chr9:20797406-20797407(-) m6A CDS//exon       25412662 chr9:20797415-20797416(-) m6A CDS//exon       25412662 chr9:20797421-20797422(-) m6A CDS//exon       25412662 chr9:20798621-20798622(-) m6A CDS//exon       25683224//25412662 chr9:20799414-20799415(-) m6A CDS//exon       25412662 chr9:20799421-20799422(-) m6A CDS//exon       25412662 chr9:20800244-20800245(-) m6A CDS//exon       25412662 chr9:20801088-20801089(-) m6A CDS//exon       25412662 chr9:20803045-20803046(-) m6A CDS//exon       25683224//25412662 chr9:20804656-20804657(-) m6A CDS//exon       25683224//25412662 chr9:20804730-20804731(-) m6A CDS//exon       25683224//25412662 chr9:20804755-20804756(-) m6A CDS//exon       25683224//25412662 chr9:20804769-20804770(-) m6A CDS//exon       25683224//25412662 chr9:20804890-20804891(-) m6A CDS//exon       25683224//25412662 chr9:20804952-20804953(-) m6A CDS//exon       25683224//25412662 chr9:20804961-20804962(-) m6A CDS//exon       25683224//25412662 chr9:20807608-20807609(-) m6A CDS//exon       25683224//25412662 chr9:20807645-20807646(-) m6A CDS//exon       25683224//25412662 chr9:20807653-20807654(-) m6A CDS//exon       25683224//25412662 chr9:20807729-20807730(-) m6A CDS//exon       25683224//25412662 chr9:20807736-20807737(-) m6A CDS//exon       25683224//25412662 chr9:20808382-20808383(-) m6A CDS//exon       25683224//25412662 chr9:20808432-20808433(-) m6A CDS//exon       25683224//25412662 chr9:20810058-20810059(-) m6A CDS//exon       25683224//25412662 chr9:20810096-20810097(-) m6A CDS//exon       25683224//25412662//25569111 chr9:20814935-20814936(-) m6A CDS//exon       25683224//25412662//25569111 chr9:20814998-20814999(-) m6A 5'UTR//exon       25412662//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Col5a3

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar