Detail Information

Basic Information:


  VIRBase ID:  

VHID00635835

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:           Zhx1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-5-5p Zhx1
miRBase
Accession/Entrez ID		 MIMAT0001568 22770
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Zhx1
chr15:58048008-58048009(-) m6A 3'UTR       24981863//26404942
chr15:58048055-58048056(-) m6A 3'UTR       24981863//25456834//25569111//26404942
chr15:58048081-58048082(-) m6A 3'UTR       24981863//25569111//26404942
chr15:58048094-58048095(-) m6A 3'UTR       24981863//25569111//26404942
chr15:58048124-58048125(-) m6A 3'UTR       24981863//25569111//26404942
chr15:58048186-58048187(-) m6A 3'UTR       24981863
chr15:58048198-58048199(-) m6A 3'UTR       24981863
chr15:58048508-58048509(-) m6A 3'UTR       24981863//22608085
chr15:58048566-58048567(-) m6A 3'UTR       25456834//25412662//24981863//25569111//26404942//22608085
chr15:58048616-58048617(-) m6A 3'UTR       25456834//25412662//24981863//25569111//26404942//22608085
chr15:58048639-58048640(-) m6A 3'UTR       25456834//25412662//24981863//25569111//26404942//22608085
chr15:58048667-58048668(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085
chr15:58052271-58052272(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr15:58052294-58052295(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr15:58052385-58052386(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr15:58052442-58052443(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960
chr15:58052452-58052453(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960
chr15:58052504-58052505(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960
chr15:58052510-58052511(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960
chr15:58052539-58052540(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960
chr15:58052548-58052549(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960
chr15:58052583-58052584(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr15:58052607-58052608(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr15:58052692-58052693(-) m6A CDS       25683224//24981863//25569111//22608085
chr15:58052744-58052745(-) m6A CDS       25683224//24981863//22608085
chr15:58052804-58052805(-) m6A CDS       25683224//24981863//22608085
chr15:58052846-58052847(-) m6A CDS       25683224//24981863//22608085
chr15:58052867-58052868(-) m6A CDS       25683224//24981863//22608085
chr15:58052891-58052892(-) m6A CDS       25683224//24981863//22608085
chr15:58052984-58052985(-) m6A CDS       24981863
chr15:58053030-58053031(-) m6A CDS       24981863
chr15:58053035-58053036(-) m6A CDS       24981863
chr15:58053122-58053123(-) m6A CDS       25683224//24981863//25569111
chr15:58053174-58053175(-) m6A CDS       25683224//24981863//25569111//22608085
chr15:58053204-58053205(-) m6A CDS       25683224//24981863//25569111//22608085
chr15:58053212-58053213(-) m6A CDS       25683224//24981863//25569111//22608085
chr15:58053226-58053227(-) m6A CDS       25683224//24981863//25569111//22608085
chr15:58053414-58053415(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr15:58053434-58053435(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr15:58053466-58053467(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr15:58053486-58053487(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr15:58053525-58053526(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr15:58053532-58053533(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr15:58053578-58053579(-) m6A CDS       24981863//25569111//22608085
chr15:58053638-58053639(-) m6A CDS       24981863//25569111//22608085
chr15:58053689-58053690(-) m6A CDS       24981863//25569111//22608085
chr15:58053752-58053753(-) m6A CDS       24981863//25569111//22608085
chr15:58053773-58053774(-) m6A CDS       24981863//25569111//22608085
chr15:58053786-58053787(-) m6A CDS       25456834//24981863//25569111//22608085
chr15:58053818-58053819(-) m6A CDS       25456834//24981863//25569111//22608085
chr15:58053870-58053871(-) m6A CDS       25456834//24981863//25569111//22608085
chr15:58054027-58054028(-) m6A CDS       24981863//25569111//22608085
chr15:58054033-58054034(-) m6A CDS       24981863//25569111//22608085
chr15:58054270-58054271(-) m6A CDS       24981863//22608085
chr15:58054307-58054308(-) m6A CDS       24981863//25456834//26404942//22608085
chr15:58054356-58054357(-) m6A CDS       25683224//25412662//24981863//25456834//25569111//26404942//22608085
chr15:58054413-58054414(-) m6A CDS       25683224//25412662//24981863//25456834//25569111//26404942//22608085
chr15:58054424-58054425(-) m6A CDS       25683224//25412662//24981863//25456834//25569111//26404942//22608085
chr15:58054572-58054573(-) m6A CDS       25412662//24981863//25569111//22608085
chr15:58054613-58054614(-) m6A CDS       25412662//24981863//25569111//22608085
chr15:58054916-58054917(-) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr15:58054960-58054961(-) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr15:58054981-58054982(-) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr15:58069343-58069344(-) m6A 5'UTR//exon//intron       25683224//24981863//25569111
chr15:58069407-58069408(-) m6A 5'UTR//exon//intron       25683224//24981863
chr15:58069425-58069426(-) m6A 5'UTR//exon//intron       25683224//24981863
chr15:58076095-58076096(-) m6A intron       25683224//24981863
chr15:58076107-58076108(-) m6A intron       25683224//24981863
chr15:58076132-58076133(-) m6A 5'UTR//intron       25683224//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate Zhx1
Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-5-5p
Interactor2: Zhx1

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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