Basic Information:

  VIRBase ID:  

VHID00635799

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Tln1:  NM_011602     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Tln1
miRBase Accession/Entrez ID	MIMAT0001568	21894
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	Tln

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tln1	chr4:43531539-43531540(-) m6A 3'UTR       25569111 chr4:43531548-43531549(-) m6A 3'UTR       25569111 chr4:43531554-43531555(-) m6A 3'UTR       24981863//25569111 chr4:43531685-43531686(-) m6A 3'UTR       24981863//25456834//25569111 chr4:43531837-43531838(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr4:43531881-43531882(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr4:43531921-43531922(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr4:43531934-43531935(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr4:43532246-43532247(-) m6A CDS       25683224//25412662//24981863//25569111 chr4:43532854-43532855(-) m6A CDS       25683224//25412662//22608085 chr4:43532931-43532932(-) m6A CDS       25683224//25412662//22608085 chr4:43533399-43533400(-) m6A CDS       25683224//25412662 chr4:43533409-43533410(-) m6A CDS       25683224//25412662 chr4:43533559-43533560(-) m6A CDS       25683224//25412662 chr4:43533628-43533629(-) m6A CDS       25683224//25412662//22608085 chr4:43533653-43533654(-) m6A CDS       25683224//25412662//22608085 chr4:43533662-43533663(-) m6A CDS       25683224//25412662//22608085 chr4:43533675-43533676(-) m6A CDS       25683224//25412662//22608085 chr4:43533923-43533924(-) m6A CDS       25683224//22608085 chr4:43533945-43533946(-) m6A CDS       25683224//22608085 chr4:43533951-43533952(-) m6A CDS       25683224//22608085 chr4:43535602-43535603(-) m6A CDS       25683224//22608085 chr4:43535747-43535748(-) m6A CDS       25683224//22608085 chr4:43538075-43538076(-) m6A CDS       25412662//22608085 chr4:43538214-43538215(-) m6A CDS       25683224//25412662//22608085 chr4:43538274-43538275(-) m6A CDS       25683224//25412662//22608085 chr4:43543907-43543908(-) m6A CDS       25412662//22608085 chr4:43544307-43544308(-) m6A CDS       25412662//22608085 chr4:43544318-43544319(-) m6A CDS       25412662//22608085 chr4:43544361-43544362(-) m6A CDS       25683224//25412662//22608085 chr4:43544459-43544460(-) m6A CDS       25683224//22608085 chr4:43544583-43544584(-) m6A CDS       25683224//22608085 chr4:43544842-43544843(-) m6A CDS       25683224//22608085 chr4:43544901-43544902(-) m6A CDS       25683224//22608085 chr4:43544951-43544952(-) m6A CDS       25683224//22608085 chr4:43545136-43545137(-) m6A CDS       25683224//22608085 chr4:43545175-43545176(-) m6A CDS       25683224//22608085 chr4:43545685-43545686(-) m6A CDS//intron       25412662 chr4:43545958-43545959(-) m6A CDS//intron       25412662//22608085 chr4:43546819-43546820(-) m6A CDS//intron       25412662//22608085 chr4:43546870-43546871(-) m6A CDS       25412662//22608085 chr4:43549173-43549174(-) m6A CDS       25412662//22608085 chr4:43549353-43549354(-) m6A CDS       25412662//22608085 chr4:43550274-43550275(-) Y CDS//exon//intron       26075521 chr4:43551276-43551277(-) m6A CDS       25683224//25412662 chr4:43553059-43553060(-) m6A CDS       25683224//25412662//22608085 chr4:43555284-43555285(-) m6A CDS//exon       25683224//25412662 chr4:43555299-43555300(-) m6A CDS//exon       25683224//25412662 chr4:43555320-43555321(-) m6A CDS//exon       25683224//25412662//24981863//25456834 chr4:43555376-43555377(-) m6A CDS//exon       25683224//25412662//24981863//25456834 chr4:43555387-43555388(-) m6A CDS//exon       25683224//25412662//24981863//25456834 chr4:43555398-43555399(-) m6A CDS//exon       25683224//25412662//24981863//25456834 chr4:43555407-43555408(-) m6A CDS//exon       25683224//25412662//24981863//25456834 chr4:43555589-43555590(-) m6A exon//intron       25683224//25412662//24981863//25456834 chr4:43555664-43555665(-) m6A CDS//exon       25683224//25412662//24981863 chr4:43555669-43555670(-) m6A CDS//exon       25683224//25412662//24981863 chr4:43555682-43555683(-) m6A CDS//exon       25683224//25412662//24981863 chr4:43555688-43555689(-) m6A CDS//exon       25683224//25412662//24981863 chr4:43555883-43555884(-) m6A CDS//exon       25683224//25412662//24981863 chr4:43555893-43555894(-) m6A CDS//exon       25683224//25412662//24981863 chr4:43555917-43555918(-) m6A CDS//exon       25683224//25412662//22608085 chr4:43555954-43555955(-) m6A CDS//exon       25683224//25412662//25569111//22608085 chr4:43556310-43556311(-) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085 chr4:43558390-43558391(-) m6A 5'UTR//intron       25412662//24981863//25569111 chr4:43558409-43558410(-) m6A 5'UTR//intron       25412662//24981863//25569111 chr4:43558455-43558456(-) m6A 5'UTR//intron       25412662//24981863//25569111 chr4:43559513-43559514(-) m6A exon//intron       25456834//24981863 chr4:43559552-43559553(-) m6A exon//intron       25456834//24981863//22608085 chr4:43562326-43562327(-) m6A 5'UTR//exon       25683224//25412662//24981863//25569111 chr4:43562422-43562423(-) m6A exon       24981863//25569111 chr4:43562442-43562443(-) m6A exon       24981863//25569111 chr4:43562598-43562599(-) m6A exon       24981863 chr4:43562679-43562680(-) m6A exon       24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Tln1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar