Basic Information:

  VIRBase ID:  

VHID00635731

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Sema5a:  NM_009154     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Sema5a
miRBase Accession/Entrez ID	MIMAT0001568	20356
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	5930434A13//9130201M22Rik//AI464145//sem//Semaf//semF

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Sema5a	chr15:32245114-32245115(+) m6A 5'UTR       25683224//25412662 chr15:32245124-32245125(+) m6A 5'UTR       25683224//25412662 chr15:32245233-32245234(+) m6A 5'UTR       25683224//22608085 chr15:32417351-32417352(+) m6A 5'UTR       25683224//25412662//22608085 chr15:32417371-32417372(+) m6A 5'UTR       25683224//25412662//22608085 chr15:32417438-32417439(+) m6A CDS       25683224//22608085 chr15:32417454-32417455(+) m6A CDS       25683224//22608085 chr15:32417461-32417462(+) m6A CDS       25683224//22608085 chr15:32460291-32460292(+) m6A CDS       25683224//22608085 chr15:32460300-32460301(+) m6A CDS       25683224//22608085 chr15:32474379-32474380(+) m6A CDS       25683224//22608085 chr15:32548727-32548728(+) m6A CDS       25683224//22608085 chr15:32548757-32548758(+) m6A CDS       25683224//22608085 chr15:32548777-32548778(+) m6A CDS       25683224//22608085 chr15:32550431-32550432(+) m6A CDS       25683224//22608085 chr15:32562496-32562497(+) m6A CDS       25683224//22608085 chr15:32562560-32562561(+) m6A CDS       25683224//22608085 chr15:32568713-32568714(+) m6A CDS       25683224//22608085 chr15:32568777-32568778(+) m6A CDS       25683224//22608085 chr15:32568797-32568798(+) m6A CDS       25683224//22608085 chr15:32574828-32574829(+) m6A CDS       25683224//22608085 chr15:32574846-32574847(+) m6A CDS       25683224//22608085 chr15:32574861-32574862(+) m6A CDS       25683224//22608085 chr15:32574939-32574940(+) m6A CDS       25683224//22608085 chr15:32574989-32574990(+) m6A CDS       25683224//22608085 chr15:32609370-32609371(+) m6A CDS       25683224//25412662//22608085 chr15:32609422-32609423(+) m6A CDS       25683224//25412662//22608085 chr15:32618828-32618829(+) m6A CDS       25683224//25412662//22608085 chr15:32628189-32628190(+) m6A CDS       25683224//25412662 chr15:32631266-32631267(+) m6A CDS       25683224//25412662//22608085 chr15:32631275-32631276(+) m6A CDS       25683224//25412662//22608085 chr15:32631384-32631385(+) m6A CDS       25683224//25412662//22608085 chr15:32640978-32640979(+) m6A CDS       25683224//25412662//22608085 chr15:32641009-32641010(+) m6A CDS       25683224//25412662 chr15:32641020-32641021(+) m6A CDS       25683224//25412662 chr15:32641075-32641076(+) m6A CDS       25683224//25412662 chr15:32669449-32669450(+) m6A CDS       25683224//25412662 chr15:32669571-32669572(+) m6A CDS       25683224//22608085 chr15:32669608-32669609(+) m6A CDS       25683224//22608085 chr15:32673328-32673329(+) m6A CDS       25683224//24981863//22608085 chr15:32673387-32673388(+) m6A CDS       25683224//24981863//22608085 chr15:32673412-32673413(+) m6A CDS       25683224//24981863//22608085 chr15:32673433-32673434(+) m6A CDS       25683224//24981863//22608085 chr15:32673461-32673462(+) m6A CDS       25683224//24981863//22608085 chr15:32679168-32679169(+) m6A CDS       25683224//22608085 chr15:32679208-32679209(+) m6A CDS       25683224//22608085 chr15:32679221-32679222(+) m6A CDS       25683224//22608085 chr15:32679255-32679256(+) m6A CDS       25683224//22608085 chr15:32681486-32681487(+) m6A CDS       25683224//22608085 chr15:32686814-32686815(+) m6A CDS       25683224//24981863 chr15:32686819-32686820(+) m6A CDS       25683224//24981863 chr15:32689308-32689309(+) m6A CDS       25683224//24981863//25569111//22608085 chr15:32689332-32689333(+) m6A CDS       25683224//24981863//25569111//22608085 chr15:32689364-32689365(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:32689443-32689444(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:32689460-32689461(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:32689512-32689513(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:32689533-32689534(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:32689539-32689540(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:32689616-32689617(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr15:32689674-32689675(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr15:32689749-32689750(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr15:32689803-32689804(+) m6A 3'UTR       25683224//24981863//25569111 chr15:32689811-32689812(+) m6A 3'UTR       25683224//24981863//25569111 chr15:32689952-32689953(+) m6A 3'UTR       24981863 chr15:32690341-32690342(+) m6A 3'UTR       24981863 chr15:32691103-32691104(+) m6A 3'UTR       25683224//22608085 chr15:32691133-32691134(+) m6A 3'UTR       25683224//22608085 chr15:32691782-32691783(+) Y 3'UTR//exon       26075521 chr15:32692660-32692661(+) m6A 3'UTR       25683224//22608085 chr15:32694872-32694873(+) m6A 3'UTR       25683224//25569111 chr15:32694907-32694908(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr15:32694919-32694920(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr15:32694993-32694994(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr15:32695010-32695011(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr15:32695053-32695054(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr15:32695063-32695064(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr15:32695109-32695110(+) m6A 3'UTR       25683224//24981863//25569111 chr15:32695214-32695215(+) m6A 3'UTR       25683224//24981863 chr15:32695343-32695344(+) m6A 3'UTR       25683224//24981863 chr15:32695588-32695589(+) m6A 3'UTR       25683224//24981863 chr15:32695611-32695612(+) m6A 3'UTR       25683224//24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Sema5a

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar