Basic Information:

  VIRBase ID:  

VHID00635583

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Lifr:  NM_001113386     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Lifr
miRBase Accession/Entrez ID	MIMAT0001568	16880
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	A230075M04Rik//AW061234//LIF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Lifr	chr15:7135065(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Lifr	chr15:7185065(+) C-I intron -    22448268

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Lifr	chr15:7129695-7129696(+) m6A 5'UTR       25412662//24981863//25569111 chr15:7129729-7129730(+) m6A 5'UTR       25412662//25569111 chr15:7129743-7129744(+) m6A 5'UTR       25412662//25569111 chr15:7130906-7130907(+) m6A 5'UTR//intron       25412662//25569111 chr15:7154355-7154356(+) m6A 5'UTR//intron       25683224 chr15:7154396-7154397(+) m6A 5'UTR       25683224 chr15:7154405-7154406(+) m6A 5'UTR       25683224 chr15:7154431-7154432(+) m6A CDS       25683224 chr15:7154451-7154452(+) m6A CDS       25683224 chr15:7154478-7154479(+) m6A CDS       25683224//22608085 chr15:7157164-7157165(+) m6A CDS       25683224//22608085 chr15:7157200-7157201(+) m6A CDS       25683224//22608085 chr15:7157238-7157239(+) m6A CDS       25683224//22608085 chr15:7157263-7157264(+) m6A CDS       25683224//22608085 chr15:7159415-7159416(+) m6A CDS       25683224//22608085 chr15:7164542-7164543(+) m6A CDS       25683224//22608085 chr15:7164679-7164680(+) m6A CDS       25683224//22608085 chr15:7166931-7166932(+) m6A CDS       25683224//22608085 chr15:7166936-7166937(+) m6A CDS       25683224//22608085 chr15:7166943-7166944(+) m6A CDS       25683224//22608085 chr15:7167048-7167049(+) m6A CDS       25683224//22608085 chr15:7169028-7169029(+) m6A CDS       25683224//22608085 chr15:7169047-7169048(+) m6A CDS       25683224//22608085 chr15:7172890-7172891(+) m6A CDS       25683224//22608085 chr15:7172943-7172944(+) m6A CDS       25683224//22608085 chr15:7173429-7173430(+) m6A CDS       25683224 chr15:7173442-7173443(+) m6A CDS       25683224 chr15:7181888-7181889(+) m6A CDS       25683224//24981863//22608085 chr15:7181984-7181985(+) m6A CDS       25683224//22608085 chr15:7182005-7182006(+) m6A CDS       25683224//22608085 chr15:7182016-7182017(+) m6A CDS       25683224//22608085 chr15:7185610-7185611(+) m6A CDS       25683224//22608085 chr15:7186889-7186890(+) m6A CDS       25683224 chr15:7186912-7186913(+) m6A CDS       25683224 chr15:7186942-7186943(+) m6A CDS       25683224 chr15:7187024-7187025(+) m6A CDS       25683224//25569111//22608085 chr15:7190124-7190125(+) m6A CDS       25683224//25569111//22608085 chr15:7190155-7190156(+) m6A CDS       25683224//25569111 chr15:7190563-7190564(+) m6A CDS       25683224//25569111 chr15:7190576-7190577(+) m6A CDS       25683224//24981863//25569111 chr15:7190591-7190592(+) m6A CDS       25683224//24981863//25569111 chr15:7190693-7190694(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr15:7190702-7190703(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:7190753-7190754(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:7190918-7190919(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:7190947-7190948(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:7190961-7190962(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:7190978-7190979(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:7191020-7191021(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:7191101-7191102(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr15:7191140-7191141(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr15:7191152-7191153(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr15:7191256-7191257(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:7191281-7191282(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:7191375-7191376(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:7191412-7191413(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:7191425-7191426(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:7191433-7191434(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:7191555-7191556(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr15:7191570-7191571(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr15:7191612-7191613(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr15:7191758-7191759(+) m6A 3'UTR       25683224//24981863//25569111 chr15:7191779-7191780(+) m6A 3'UTR       25569111 chr15:7191853-7191854(+) m6A 3'UTR       25683224//25569111 chr15:7191930-7191931(+) m6A 3'UTR       25569111 chr15:7192235-7192236(+) m6A 3'UTR       - chr15:7192256-7192257(+) m6A 3'UTR       25683224 chr15:7192262-7192263(+) m6A 3'UTR       25683224 chr15:7192305-7192306(+) m6A 3'UTR       25683224 chr15:7192325-7192326(+) m6A 3'UTR       25683224 chr15:7193286-7193287(+) m6A 3'UTR       25683224//24981863 chr15:7193310-7193311(+) m6A 3'UTR       25683224//24981863 chr15:7193412-7193413(+) m6A 3'UTR       25683224 chr15:7193476-7193477(+) m6A 3'UTR       25683224 chr15:7193591-7193592(+) m6A 3'UTR       25683224//24981863//25456834 chr15:7193602-7193603(+) m6A 3'UTR       25683224//24981863 chr15:7193617-7193618(+) m6A 3'UTR       25683224//24981863 chr15:7193659-7193660(+) m6A 3'UTR       25683224//24981863 chr15:7193935-7193936(+) m6A 3'UTR       25683224//25569111 chr15:7194020-7194021(+) m6A 3'UTR       25569111 chr15:7194143-7194144(+) m6A 3'UTR       25683224//25456834 chr15:7194229-7194230(+) m6A 3'UTR       25683224//25456834//25569111 chr15:7194418-7194419(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr15:7194439-7194440(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr15:7194462-7194463(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr15:7194502-7194503(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr15:7194507-7194508(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr15:7194957-7194958(+) m6A 3'UTR       25683224 chr15:7195041-7195042(+) m6A 3'UTR       25683224//24981863//25456834 chr15:7195063-7195064(+) m6A 3'UTR       25683224 chr15:7195072-7195073(+) m6A 3'UTR       25683224 chr15:7196366-7196367(+) m6A 3'UTR       25683224//22608085 chr15:7196536-7196537(+) Y 3'UTR//exon       26075521 chr15:7197098-7197099(+) m6A 3'UTR       24981863//25569111//26404942//22608085 chr15:7197173-7197174(+) m6A 3'UTR       25412662//24981863//25569111 chr15:7197201-7197202(+) m6A 3'UTR       25412662//24981863 chr15:7197252-7197253(+) m6A 3'UTR       24981863//26404942 chr15:7197300-7197301(+) m6A 3'UTR       24981863//26404942 chr15:7197317-7197318(+) m6A 3'UTR       24981863//26404942 chr15:7197342-7197343(+) m6A 3'UTR       24981863//26404942 chr15:7197358-7197359(+) m6A 3'UTR       24981863//26404942

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Lifr

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar