Detail Information

Basic Information:


  VIRBase ID:  

VHID00635579

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:           Lama1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-5-5p Lama1
miRBase
Accession/Entrez ID
MIMAT0001568 16772
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - AA408497//L//Lama

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Lama1
chr17:67697298-67697299(+) m6A 5'UTR       25569111
chr17:67716784-67716785(+) m6A CDS       25569111
chr17:67774576-67774577(+) m6A CDS       25683224
chr17:67775878-67775879(+) m6A CDS       25683224
chr17:67776960-67776961(+) m6A CDS       25683224
chr17:67777030-67777031(+) m6A CDS       25683224
chr17:67804407-67804408(+) m6A CDS       -
chr17:67804449-67804450(+) m6A CDS       -
chr17:67804463-67804464(+) m6A CDS       -
chr17:67822509-67822510(+) m6A 3'UTR       25569111
chr17:67822590-67822591(+) m6A 3'UTR       25569111
chr17:67822605-67822606(+) m6A 3'UTR       25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-5-5p
Interactor2: Lama1

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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