Basic Information:

  VIRBase ID:  

VHID00635570

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-5-5p:  MIMAT0001568          Kif3a:  NM_001290805     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-5-5p	Kif3a
miRBase Accession/Entrez ID	MIMAT0001568	16568
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	Ki//Kif//Kif3//Kifl//Kn//Kns3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Kif3a	chr11:53567463-53567464(+) m6A 5'UTR       24981863//25569111 chr11:53567764-53567765(+) m6A exon//intron       25569111 chr11:53568036-53568037(+) m6A 5'UTR//intron       24981863 chr11:53570630-53570631(+) m6A CDS//exon       24981863//26404942 chr11:53570661-53570662(+) m6A CDS//exon       24981863//26404942 chr11:53570679-53570680(+) m6A CDS//exon       24981863//22608085 chr11:53570696-53570697(+) m6A CDS//exon       24981863//22608085 chr11:53570706-53570707(+) m6A CDS//exon       24981863//22608085 chr11:53570732-53570733(+) m6A CDS//exon       24981863//22608085 chr11:53570744-53570745(+) m6A CDS//exon       24981863//22608085 chr11:53583322-53583323(+) m6A 3'UTR//CDS       25412662//22608085 chr11:53583825-53583826(+) m6A 3'UTR//CDS       25412662//22608085 chr11:53583835-53583836(+) m6A 3'UTR//CDS       25412662//22608085 chr11:53583849-53583850(+) m6A 3'UTR//CDS       25412662//22608085 chr11:53583953-53583954(+) m6A 3'UTR//CDS       25683224//22608085 chr11:53583960-53583961(+) m6A 3'UTR//CDS       25683224//22608085 chr11:53583980-53583981(+) m6A 3'UTR//CDS       25683224//22608085 chr11:53584346-53584347(+) m6A 3'UTR//CDS       25683224//25412662//24981863 chr11:53584355-53584356(+) m6A 3'UTR//CDS       25683224//25412662//24981863 chr11:53584376-53584377(+) m6A 3'UTR//CDS       25683224//25412662//24981863 chr11:53586892-53586893(+) m6A 3'UTR//CDS       25683224//25412662//24981863 chr11:53588712-53588713(+) m6A CDS//intron       25683224//25412662//24981863 chr11:53593447-53593448(+) m6A CDS       25683224//25412662//24981863 chr11:53593452-53593453(+) m6A CDS       25683224//25412662//24981863 chr11:53593478-53593479(+) m6A CDS       25683224//25412662//24981863 chr11:53593494-53593495(+) m6A CDS       25683224//25412662//24981863 chr11:53593514-53593515(+) m6A CDS       25683224//25412662//24981863 chr11:53593986-53593987(+) m6A CDS       25683224//25412662//24981863 chr11:53594289-53594290(+) m6A CDS       25683224//25412662//24981863 chr11:53594336-53594337(+) m6A CDS       25683224//25412662//24981863 chr11:53594360-53594361(+) m6A CDS       25683224//25412662//24981863 chr11:53601032-53601033(+) m6A CDS       24981863 chr11:53601115-53601116(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr11:53601129-53601130(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr11:53601137-53601138(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr11:53601183-53601184(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085 chr11:53601216-53601217(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Kif3a	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-5-5p
Interactor2: Kif3a

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar